Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.71□□□□□ -1.66
Col18a1P39061 Gm22337-201ENSMUST00000157721 132 ntBASIC4.71□□□□□ -1.66
Col18a1P39061 Gm20672-201ENSMUST00000176605 261 ntBASIC4.71□□□□□ -1.66
Col18a1P39061 Gm29397-201ENSMUST00000185205 333 ntBASIC4.71□□□□□ -1.66
Col18a1P39061 Gm29597-201ENSMUST00000188035 308 ntBASIC4.71□□□□□ -1.66
Col18a1P39061 Gm43142-201ENSMUST00000198670 361 ntBASIC4.71□□□□□ -1.66
Col18a1P39061 Gm43393-201ENSMUST00000200147 194 ntBASIC4.71□□□□□ -1.66
Col18a1P39061 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC4.71□□□□□ -1.66
Col18a1P39061 Gm45789-201ENSMUST00000213038 364 ntBASIC4.71□□□□□ -1.66
Col18a1P39061 AC170086.1-201ENSMUST00000225190 497 ntBASIC4.71□□□□□ -1.66
Col18a1P39061 Gm22249-201ENSMUST00000082485 136 ntBASIC4.71□□□□□ -1.66
Col18a1P39061 Gm23055-201ENSMUST00000082805 94 ntBASIC4.71□□□□□ -1.66
Col18a1P39061 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Col18a1P39061 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC4.71□□□□□ -1.66
Col18a1P39061 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Col18a1P39061 Gm42446-201ENSMUST00000199783 3284 ntBASIC4.71□□□□□ -1.66
Col18a1P39061 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Col18a1P39061 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Col18a1P39061 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col18a1P39061 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC4.7□□□□□ -1.66
Col18a1P39061 Gm25373-201ENSMUST00000158156 115 ntBASIC4.7□□□□□ -1.66
Col18a1P39061 Gm24675-201ENSMUST00000158757 259 ntBASIC4.7□□□□□ -1.66
Col18a1P39061 Gm21809-201ENSMUST00000178495 468 ntBASIC4.7□□□□□ -1.66
Col18a1P39061 Mir6905-201ENSMUST00000184228 70 ntBASIC4.7□□□□□ -1.66
Col18a1P39061 Igkv11-114-201ENSMUST00000200013 346 ntBASIC4.7□□□□□ -1.66
Col18a1P39061 Gm8423-201ENSMUST00000211387 607 ntBASIC4.7□□□□□ -1.66
Col18a1P39061 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col18a1P39061 Fus-202ENSMUST00000079045 2623 ntBASIC4.7□□□□□ -1.66
Col18a1P39061 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.7□□□□□ -1.66
Col18a1P39061 Gm43663-201ENSMUST00000198643 1505 ntBASIC4.7□□□□□ -1.66
Col18a1P39061 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.7□□□□□ -1.66
Col18a1P39061 Gm43753-201ENSMUST00000196539 3309 ntBASIC4.7□□□□□ -1.66
Col18a1P39061 Gm5653-201ENSMUST00000223393 1337 ntBASIC4.7□□□□□ -1.66
Col18a1P39061 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Col18a1P39061 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Col18a1P39061 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col18a1P39061 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col18a1P39061 Gm12448-201ENSMUST00000118852 655 ntBASIC4.7□□□□□ -1.66
Col18a1P39061 Gm13518-201ENSMUST00000120018 233 ntBASIC4.7□□□□□ -1.66
Col18a1P39061 Gm11556-201ENSMUST00000120751 288 ntBASIC4.7□□□□□ -1.66
Col18a1P39061 Gm11761-201ENSMUST00000121392 445 ntBASIC4.7□□□□□ -1.66
Col18a1P39061 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col18a1P39061 Gm18520-201ENSMUST00000174783 658 ntBASIC4.7□□□□□ -1.66
Col18a1P39061 Gm23162-201ENSMUST00000175081 121 ntBASIC4.7□□□□□ -1.66
Col18a1P39061 Gm9830-201ENSMUST00000178509 357 ntBASIC4.7□□□□□ -1.66
Col18a1P39061 Gm27747-201ENSMUST00000184707 85 ntBASIC4.7□□□□□ -1.66
Col18a1P39061 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.7□□□□□ -1.66
Col18a1P39061 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC4.7□□□□□ -1.66
Col18a1P39061 Gm44157-201ENSMUST00000204720 410 ntBASIC4.7□□□□□ -1.66
Col18a1P39061 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC4.7□□□□□ -1.66
Col18a1P39061 Gm4263-202ENSMUST00000221392 667 ntBASIC4.7□□□□□ -1.66
Col18a1P39061 AC154515.2-201ENSMUST00000226093 406 ntBASIC4.7□□□□□ -1.66
Col18a1P39061 Gm24928-201ENSMUST00000083399 107 ntBASIC4.7□□□□□ -1.66
Col18a1P39061 Gm25897-201ENSMUST00000083709 107 ntBASIC4.7□□□□□ -1.66
Col18a1P39061 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Col18a1P39061 Gm18913-201ENSMUST00000204311 1789 ntBASIC4.7□□□□□ -1.66
Col18a1P39061 AC132237.1-201ENSMUST00000220950 4475 ntBASIC4.69□□□□□ -1.66
Col18a1P39061 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col18a1P39061 Gm42547-201ENSMUST00000201159 3798 ntBASIC4.69□□□□□ -1.66
Col18a1P39061 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC4.69□□□□□ -1.66
Col18a1P39061 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col18a1P39061 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.69□□□□□ -1.66
Col18a1P39061 Gm23691-201ENSMUST00000101878 107 ntBASIC4.69□□□□□ -1.66
Col18a1P39061 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Col18a1P39061 Gm22939-201ENSMUST00000103958 131 ntBASIC4.69□□□□□ -1.66
Col18a1P39061 Gm24836-201ENSMUST00000122609 108 ntBASIC4.69□□□□□ -1.66
Col18a1P39061 Gm19641-201ENSMUST00000188432 417 ntBASIC4.69□□□□□ -1.66
Col18a1P39061 CT010455.1-201ENSMUST00000218579 413 ntBASIC4.69□□□□□ -1.66
Col18a1P39061 Gm7198-201ENSMUST00000219635 1074 ntBASIC4.69□□□□□ -1.66
Col18a1P39061 Gm22704-201ENSMUST00000083027 137 ntBASIC4.69□□□□□ -1.66
Col18a1P39061 Gm10813-201ENSMUST00000099936 90 ntBASIC4.69□□□□□ -1.66
Col18a1P39061 Gm44679-201ENSMUST00000207202 2908 ntBASIC4.69□□□□□ -1.66
Col18a1P39061 Gm14914-201ENSMUST00000117576 2031 ntBASIC4.69□□□□□ -1.66
Col18a1P39061 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col18a1P39061 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col18a1P39061 AC153948.1-201ENSMUST00000219080 3838 ntBASIC4.69□□□□□ -1.66
Col18a1P39061 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col18a1P39061 Gm8935-202ENSMUST00000105727 1959 ntBASIC4.68□□□□□ -1.66
Col18a1P39061 Gm14537-201ENSMUST00000117464 599 ntBASIC4.68□□□□□ -1.66
Col18a1P39061 Gm24106-201ENSMUST00000175498 127 ntBASIC4.68□□□□□ -1.66
Col18a1P39061 Gm22263-201ENSMUST00000180060 104 ntBASIC4.68□□□□□ -1.66
Col18a1P39061 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC4.68□□□□□ -1.66
Col18a1P39061 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC4.68□□□□□ -1.66
Col18a1P39061 Gm35931-201ENSMUST00000203931 448 ntBASIC4.68□□□□□ -1.66
Col18a1P39061 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC4.68□□□□□ -1.66
Col18a1P39061 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col18a1P39061 AC164561.1-201ENSMUST00000220414 115 ntBASIC4.68□□□□□ -1.66
Col18a1P39061 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col18a1P39061 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col18a1P39061 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col18a1P39061 Gm45178-201ENSMUST00000207744 4110 ntBASIC4.68□□□□□ -1.66
Col18a1P39061 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col18a1P39061 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col18a1P39061 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Col18a1P39061 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Col18a1P39061 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.68□□□□□ -1.66
Col18a1P39061 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col18a1P39061 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col18a1P39061 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Col18a1P39061 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 140.6 ms