Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC22.15■■□□□ 1.14
Uspl1Q3ULM6 Gm16061-201ENSMUST00000122167 857 ntBASIC22.15■■□□□ 1.14
Uspl1Q3ULM6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Uspl1Q3ULM6 Gm45058-201ENSMUST00000205810 766 ntBASIC22.15■■□□□ 1.14
Uspl1Q3ULM6 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC22.15■■□□□ 1.14
Uspl1Q3ULM6 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Uspl1Q3ULM6 Gm9987-201ENSMUST00000069768 567 ntBASIC22.15■■□□□ 1.14
Uspl1Q3ULM6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC22.15■■□□□ 1.14
Uspl1Q3ULM6 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Uspl1Q3ULM6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Uspl1Q3ULM6 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC22.14■■□□□ 1.14
Uspl1Q3ULM6 Spsb2-203ENSMUST00000112473 1322 ntBASIC22.14■■□□□ 1.14
Uspl1Q3ULM6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC22.14■■□□□ 1.13
Uspl1Q3ULM6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Uspl1Q3ULM6 Gm11841-201ENSMUST00000117060 1963 ntBASIC22.14■■□□□ 1.13
Uspl1Q3ULM6 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Uspl1Q3ULM6 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Uspl1Q3ULM6 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Uspl1Q3ULM6 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Uspl1Q3ULM6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Uspl1Q3ULM6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Uspl1Q3ULM6 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
Uspl1Q3ULM6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC22.13■■□□□ 1.13
Uspl1Q3ULM6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC22.13■■□□□ 1.13
Uspl1Q3ULM6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Uspl1Q3ULM6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Uspl1Q3ULM6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Uspl1Q3ULM6 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
Uspl1Q3ULM6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC22.12■■□□□ 1.13
Uspl1Q3ULM6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Uspl1Q3ULM6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Uspl1Q3ULM6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Uspl1Q3ULM6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
Uspl1Q3ULM6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Uspl1Q3ULM6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Uspl1Q3ULM6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Uspl1Q3ULM6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Uspl1Q3ULM6 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Uspl1Q3ULM6 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Uspl1Q3ULM6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Uspl1Q3ULM6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Uspl1Q3ULM6 Wnt10b-204ENSMUST00000226655 1807 ntBASIC22.11■■□□□ 1.13
Uspl1Q3ULM6 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Uspl1Q3ULM6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Uspl1Q3ULM6 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
Uspl1Q3ULM6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Uspl1Q3ULM6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Uspl1Q3ULM6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Uspl1Q3ULM6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Uspl1Q3ULM6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Uspl1Q3ULM6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC22.11■■□□□ 1.13
Uspl1Q3ULM6 Gm18958-201ENSMUST00000174258 762 ntBASIC22.11■■□□□ 1.13
Uspl1Q3ULM6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Uspl1Q3ULM6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Uspl1Q3ULM6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
Uspl1Q3ULM6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Uspl1Q3ULM6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Uspl1Q3ULM6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Uspl1Q3ULM6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Uspl1Q3ULM6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Uspl1Q3ULM6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Uspl1Q3ULM6 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Uspl1Q3ULM6 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Uspl1Q3ULM6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC22.1■■□□□ 1.13
Uspl1Q3ULM6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Uspl1Q3ULM6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Uspl1Q3ULM6 Gm18959-201ENSMUST00000208954 655 ntBASIC22.1■■□□□ 1.13
Uspl1Q3ULM6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Uspl1Q3ULM6 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Uspl1Q3ULM6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Uspl1Q3ULM6 Actl10-202ENSMUST00000226583 1501 ntBASIC22.1■■□□□ 1.13
Uspl1Q3ULM6 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Uspl1Q3ULM6 Gm16401-202ENSMUST00000197463 2074 ntBASIC22.1■■□□□ 1.13
Uspl1Q3ULM6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Uspl1Q3ULM6 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Uspl1Q3ULM6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC22.1■■□□□ 1.13
Uspl1Q3ULM6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Uspl1Q3ULM6 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Uspl1Q3ULM6 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Uspl1Q3ULM6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Uspl1Q3ULM6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Uspl1Q3ULM6 Gm13474-201ENSMUST00000122466 815 ntBASIC22.09■■□□□ 1.13
Uspl1Q3ULM6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Uspl1Q3ULM6 Gm3272-201ENSMUST00000181181 1229 ntBASIC22.09■■□□□ 1.13
Uspl1Q3ULM6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Uspl1Q3ULM6 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Uspl1Q3ULM6 Gm10566-201ENSMUST00000086739 996 ntBASIC22.09■■□□□ 1.13
Uspl1Q3ULM6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Uspl1Q3ULM6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Uspl1Q3ULM6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Uspl1Q3ULM6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
Uspl1Q3ULM6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Uspl1Q3ULM6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
Uspl1Q3ULM6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC22.09■■□□□ 1.13
Uspl1Q3ULM6 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Uspl1Q3ULM6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Uspl1Q3ULM6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Uspl1Q3ULM6 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Uspl1Q3ULM6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Uspl1Q3ULM6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms