Protein–RNA interactions for Protein: P38931

SSN2, Mediator of RNA polymerase II transcription subunit 13, yeastyeast

Predictions only

Length 1,420 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN2P38931 YMR046W-AYMR046W-A 129 nt-4.36□□□□□ -3.11
SSN2P38931 YGL007C-AYGL007C-A 87 nt-4.38□□□□□ -3.11
SSN2P38931 tR(ACG)Q2tR(ACG)Q2 74 nt-4.48□□□□□ -3.13
SSN2P38931 snR64snR64 101 nt-4.56□□□□□ -3.14
SSN2P38931 YNL170WYNL170W 396 nt-4.6□□□□□ -3.15
SSN2P38931 snR62snR62 100 nt-4.61□□□□□ -3.15
SSN2P38931 YGL041C-BYGL041C-B 183 nt-4.62□□□□□ -3.15
SSN2P38931 tC(GCA)QtC(GCA)Q 76 nt-4.63□□□□□ -3.15
SSN2P38931 YLR294CYLR294C 330 nt-4.63□□□□□ -3.15
SSN2P38931 YOR225WYOR225W 330 nt-4.68□□□□□ -3.16
SSN2P38931 YLR466C-BYLR466C-B 117 nt-4.69□□□□□ -3.16
SSN2P38931 snR61snR61 90 nt-4.8□□□□□ -3.18
SSN2P38931 YNL103W-AYNL103W-A 90 nt-4.8□□□□□ -3.18
SSN2P38931 YNL338WYNL338W 159 nt-4.8□□□□□ -3.18
SSN2P38931 snR40snR40 97 nt-4.82□□□□□ -3.18
SSN2P38931 tM(CAU)Q1tM(CAU)Q1 76 nt-4.84□□□□□ -3.18
SSN2P38931 Q0144Q0144 330 nt-4.97□□□□□ -3.2
SSN2P38931 YLR149C-AYLR149C-A 87 nt-5.14□□□□□ -3.23
SSN2P38931 Q0032Q0032 291 nt-5.22□□□□□ -3.24
SSN2P38931 snR53snR53 91 nt-5.33□□□□□ -3.26
SSN2P38931 YLL066W-BYLL066W-B 171 nt-5.65□□□□□ -3.31
SSN2P38931 YMR326CYMR326C 309 nt-5.86□□□□□ -3.35
SSN2P38931 YHR217CYHR217C 462 nt-5.96□□□□□ -3.36
SSN2P38931 Q0143Q0143 153 nt-6.32□□□□□ -3.42
SSN2P38931 ATP8Q0080 147 nt-6.43□□□□□ -3.44
SSN2P38931 YBL109WYBL109W 336 nt-6.75□□□□□ -3.49
SSN2P38931 snR75snR75 89 nt-6.84□□□□□ -3.5
SSN2P38931 YDL247W-AYDL247W-A 75 nt-6.89□□□□□ -3.51
SSN2P38931 Q0092Q0092 141 nt-7.34□□□□□ -3.58
Retrieved 29 of 7,029 protein–RNA pairs in 5.5 ms