Protein–RNA interactions for Protein: P28007

GAR1, H/ACA ribonucleoprotein complex subunit GAR1, yeastyeast

Known RBP Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GAR1P28007 snR128snR128 126 nt0.57□□□□□ -2.32
GAR1P28007 UTP10YJL109C 5310 nt0.55□□□□□ -2.32
GAR1P28007 tF(GAA)BtF(GAA)B 73 nt0.49□□□□□ -2.33
GAR1P28007 tF(GAA)FtF(GAA)F 73 nt0.49□□□□□ -2.33
GAR1P28007 tF(GAA)GtF(GAA)G 73 nt0.49□□□□□ -2.33
GAR1P28007 tF(GAA)H1tF(GAA)H1 73 nt0.49□□□□□ -2.33
GAR1P28007 tF(GAA)H2tF(GAA)H2 73 nt0.49□□□□□ -2.33
GAR1P28007 tF(GAA)MtF(GAA)M 73 nt0.49□□□□□ -2.33
GAR1P28007 tF(GAA)P1tF(GAA)P1 73 nt0.49□□□□□ -2.33
GAR1P28007 tF(GAA)P2tF(GAA)P2 73 nt0.49□□□□□ -2.33
GAR1P28007 CDC65tQ(CUG)M 72 nt0.42□□□□□ -2.34
GAR1P28007 YOL013W-AYOL013W-A 192 nt0.38□□□□□ -2.35
GAR1P28007 snR87snR87 109 nt0.37□□□□□ -2.35
GAR1P28007 YMR315W-AYMR315W-A 108 nt0.31□□□□□ -2.36
GAR1P28007 YHL009W-BYHL009W-B 5409 nt0.28□□□□□ -2.36
GAR1P28007 YOR309CYOR309C 381 nt0.16□□□□□ -2.38
GAR1P28007 tP(UGG)QtP(UGG)Q 72 nt-0.15□□□□□ -2.43
GAR1P28007 snR33snR33 183 nt-0.29□□□□□ -2.46
GAR1P28007 tT(UGU)G1tT(UGU)G1 72 nt-0.36□□□□□ -2.47
GAR1P28007 tT(UGU)G2tT(UGU)G2 72 nt-0.36□□□□□ -2.47
GAR1P28007 tT(UGU)PtT(UGU)P 72 nt-0.36□□□□□ -2.47
GAR1P28007 YNR077CYNR077C 255 nt-0.45□□□□□ -2.48
GAR1P28007 YBR223W-AYBR223W-A 120 nt-0.5□□□□□ -2.49
GAR1P28007 tY(GUA)QtY(GUA)Q 84 nt-0.55□□□□□ -2.5
GAR1P28007 YBR126W-BYBR126W-B 144 nt-0.89□□□□□ -2.55
GAR1P28007 YDR543CYDR543C 300 nt-1.15□□□□□ -2.59
GAR1P28007 YOL166W-AYOL166W-A 156 nt-1.17□□□□□ -2.6
GAR1P28007 YJL136W-AYJL136W-A 84 nt-1.2□□□□□ -2.6
GAR1P28007 YJR162CYJR162C 351 nt-1.56□□□□□ -2.66
Retrieved 29 of 7,029 protein–RNA pairs in 29.9 ms