Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm15905-201ENSMUST00000137042 298 ntBASIC4.65□□□□□ -1.67
Ubp1Q811S7 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Ubp1Q811S7 Gm23901-201ENSMUST00000157570 107 ntBASIC4.65□□□□□ -1.67
Ubp1Q811S7 Gm23586-201ENSMUST00000157657 123 ntBASIC4.65□□□□□ -1.67
Ubp1Q811S7 Gm23474-201ENSMUST00000158884 75 ntBASIC4.65□□□□□ -1.67
Ubp1Q811S7 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC4.65□□□□□ -1.67
Ubp1Q811S7 Gm37713-201ENSMUST00000191746 198 ntBASIC4.65□□□□□ -1.67
Ubp1Q811S7 Gm45508-201ENSMUST00000209298 299 ntBASIC4.65□□□□□ -1.67
Ubp1Q811S7 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC4.65□□□□□ -1.67
Ubp1Q811S7 AC113031.4-201ENSMUST00000228381 514 ntBASIC4.65□□□□□ -1.67
Ubp1Q811S7 Gm23302-201ENSMUST00000082710 100 ntBASIC4.65□□□□□ -1.67
Ubp1Q811S7 Gm25482-201ENSMUST00000083225 107 ntBASIC4.65□□□□□ -1.67
Ubp1Q811S7 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Ubp1Q811S7 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Ubp1Q811S7 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Ubp1Q811S7 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
Ubp1Q811S7 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.65□□□□□ -1.67
Ubp1Q811S7 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.65□□□□□ -1.67
Ubp1Q811S7 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Ubp1Q811S7 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.65□□□□□ -1.67
Ubp1Q811S7 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.65□□□□□ -1.67
Ubp1Q811S7 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Ubp1Q811S7 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.65□□□□□ -1.67
Ubp1Q811S7 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Ubp1Q811S7 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
Ubp1Q811S7 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Ubp1Q811S7 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Ubp1Q811S7 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.64□□□□□ -1.67
Ubp1Q811S7 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Ubp1Q811S7 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Ubp1Q811S7 Gm24124-201ENSMUST00000104103 132 ntBASIC4.64□□□□□ -1.67
Ubp1Q811S7 Gm13729-201ENSMUST00000120328 406 ntBASIC4.64□□□□□ -1.67
Ubp1Q811S7 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC4.64□□□□□ -1.67
Ubp1Q811S7 Gm7840-201ENSMUST00000122086 533 ntBASIC4.64□□□□□ -1.67
Ubp1Q811S7 Gm22514-201ENSMUST00000122547 308 ntBASIC4.64□□□□□ -1.67
Ubp1Q811S7 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Ubp1Q811S7 Gm23355-201ENSMUST00000177614 107 ntBASIC4.64□□□□□ -1.67
Ubp1Q811S7 Gm23148-201ENSMUST00000180367 107 ntBASIC4.64□□□□□ -1.67
Ubp1Q811S7 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Ubp1Q811S7 Gm9687-201ENSMUST00000189312 602 ntBASIC4.64□□□□□ -1.67
Ubp1Q811S7 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Ubp1Q811S7 Gm18982-201ENSMUST00000198118 529 ntBASIC4.64□□□□□ -1.67
Ubp1Q811S7 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Ubp1Q811S7 Gm32222-201ENSMUST00000203296 298 ntBASIC4.64□□□□□ -1.67
Ubp1Q811S7 CT030166.2-201ENSMUST00000222021 368 ntBASIC4.64□□□□□ -1.67
Ubp1Q811S7 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.64□□□□□ -1.67
Ubp1Q811S7 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
Ubp1Q811S7 Gm5899-201ENSMUST00000071770 270 ntBASIC4.64□□□□□ -1.67
Ubp1Q811S7 Gm24948-201ENSMUST00000082866 207 ntBASIC4.64□□□□□ -1.67
Ubp1Q811S7 Gm25258-201ENSMUST00000083049 107 ntBASIC4.64□□□□□ -1.67
Ubp1Q811S7 Gm25651-201ENSMUST00000083782 119 ntBASIC4.64□□□□□ -1.67
Ubp1Q811S7 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Ubp1Q811S7 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Ubp1Q811S7 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Ubp1Q811S7 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Ubp1Q811S7 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Ubp1Q811S7 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Ubp1Q811S7 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.64□□□□□ -1.67
Ubp1Q811S7 Gm42548-201ENSMUST00000202669 3933 ntBASIC4.64□□□□□ -1.67
Ubp1Q811S7 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Ubp1Q811S7 Gm37115-201ENSMUST00000193750 2849 ntBASIC4.64□□□□□ -1.67
Ubp1Q811S7 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Ubp1Q811S7 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Ubp1Q811S7 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Ubp1Q811S7 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Ubp1Q811S7 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Ubp1Q811S7 Gm16128-201ENSMUST00000117855 626 ntBASIC4.63□□□□□ -1.67
Ubp1Q811S7 Gm13491-201ENSMUST00000118267 235 ntBASIC4.63□□□□□ -1.67
Ubp1Q811S7 Gm15745-201ENSMUST00000119807 115 ntBASIC4.63□□□□□ -1.67
Ubp1Q811S7 Gm12617-201ENSMUST00000121268 381 ntBASIC4.63□□□□□ -1.67
Ubp1Q811S7 Ear-ps4-201ENSMUST00000166834 450 ntBASIC4.63□□□□□ -1.67
Ubp1Q811S7 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.63□□□□□ -1.67
Ubp1Q811S7 Mir5112-201ENSMUST00000174897 60 ntBASIC4.63□□□□□ -1.67
Ubp1Q811S7 Gm27718-201ENSMUST00000183721 86 ntBASIC4.63□□□□□ -1.67
Ubp1Q811S7 Gm38270-201ENSMUST00000192721 407 ntBASIC4.63□□□□□ -1.67
Ubp1Q811S7 Gm7468-201ENSMUST00000203900 652 ntBASIC4.63□□□□□ -1.67
Ubp1Q811S7 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.63□□□□□ -1.67
Ubp1Q811S7 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Ubp1Q811S7 Gm22806-201ENSMUST00000082738 136 ntBASIC4.63□□□□□ -1.67
Ubp1Q811S7 Mir134-201ENSMUST00000083492 71 ntBASIC4.63□□□□□ -1.67
Ubp1Q811S7 Gm25896-201ENSMUST00000083713 136 ntBASIC4.63□□□□□ -1.67
Ubp1Q811S7 Gm22353-201ENSMUST00000083918 136 ntBASIC4.63□□□□□ -1.67
Ubp1Q811S7 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Ubp1Q811S7 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Ubp1Q811S7 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.63□□□□□ -1.67
Ubp1Q811S7 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Ubp1Q811S7 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.63□□□□□ -1.67
Ubp1Q811S7 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Ubp1Q811S7 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
Ubp1Q811S7 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.62□□□□□ -1.67
Ubp1Q811S7 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Ubp1Q811S7 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Ubp1Q811S7 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Ubp1Q811S7 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Ubp1Q811S7 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.62□□□□□ -1.67
Ubp1Q811S7 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Ubp1Q811S7 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC4.62□□□□□ -1.67
Ubp1Q811S7 Gm12782-201ENSMUST00000117519 727 ntBASIC4.62□□□□□ -1.67
Ubp1Q811S7 Gm26098-201ENSMUST00000157247 288 ntBASIC4.62□□□□□ -1.67
Ubp1Q811S7 Gm22447-201ENSMUST00000158155 92 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 160.2 ms