Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 AL772265.1-201ENSMUST00000214379 305 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 AC120394.1-201ENSMUST00000217153 351 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC3.15□□□□□ -1.91
Trim58Q5NCC9 AC166830.1-201ENSMUST00000224201 533 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trim58Q5NCC9 CT025525.2-201ENSMUST00000227743 423 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 AC114916.1-201ENSMUST00000228465 494 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm24622-201ENSMUST00000082619 162 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm24150-201ENSMUST00000082759 104 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm43718-201ENSMUST00000197524 1857 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm14429-201ENSMUST00000121881 2024 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm42942-201ENSMUST00000196086 1328 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm14404-201ENSMUST00000119117 1660 ntBASIC3.14□□□□□ -1.91
Trim58Q5NCC9 AC169038.1-201ENSMUST00000227378 1352 ntBASIC3.14□□□□□ -1.91
Trim58Q5NCC9 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.14□□□□□ -1.91
Trim58Q5NCC9 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Trim58Q5NCC9 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
Trim58Q5NCC9 Gm15094-201ENSMUST00000118394 1131 ntBASIC3.14□□□□□ -1.91
Trim58Q5NCC9 Gm6587-201ENSMUST00000120219 613 ntBASIC3.14□□□□□ -1.91
Trim58Q5NCC9 Gm12044-201ENSMUST00000120335 213 ntBASIC3.14□□□□□ -1.91
Trim58Q5NCC9 Gm14982-201ENSMUST00000121102 442 ntBASIC3.14□□□□□ -1.91
Trim58Q5NCC9 Gm26173-201ENSMUST00000158416 136 ntBASIC3.14□□□□□ -1.91
Trim58Q5NCC9 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Trim58Q5NCC9 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC3.14□□□□□ -1.91
Trim58Q5NCC9 Gm24019-201ENSMUST00000178620 107 ntBASIC3.14□□□□□ -1.91
Trim58Q5NCC9 Gm23269-201ENSMUST00000178701 107 ntBASIC3.14□□□□□ -1.91
Trim58Q5NCC9 Gm26243-201ENSMUST00000179260 107 ntBASIC3.14□□□□□ -1.91
Trim58Q5NCC9 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Trim58Q5NCC9 Gm43626-201ENSMUST00000198575 162 ntBASIC3.14□□□□□ -1.91
Trim58Q5NCC9 Gm44076-201ENSMUST00000203072 520 ntBASIC3.14□□□□□ -1.91
Trim58Q5NCC9 Gm32222-201ENSMUST00000203296 298 ntBASIC3.14□□□□□ -1.91
Trim58Q5NCC9 Gm19177-201ENSMUST00000204520 613 ntBASIC3.14□□□□□ -1.91
Trim58Q5NCC9 Gm44718-201ENSMUST00000206886 359 ntBASIC3.14□□□□□ -1.91
Trim58Q5NCC9 Gm44600-201ENSMUST00000208540 111 ntBASIC3.14□□□□□ -1.91
Trim58Q5NCC9 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.14□□□□□ -1.91
Trim58Q5NCC9 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.14□□□□□ -1.91
Trim58Q5NCC9 CT010455.1-201ENSMUST00000218579 413 ntBASIC3.14□□□□□ -1.91
Trim58Q5NCC9 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.14□□□□□ -1.91
Trim58Q5NCC9 AC130823.2-201ENSMUST00000226169 290 ntBASIC3.14□□□□□ -1.91
Trim58Q5NCC9 Gm23296-201ENSMUST00000082555 107 ntBASIC3.14□□□□□ -1.91
Trim58Q5NCC9 Gm24859-201ENSMUST00000082729 107 ntBASIC3.14□□□□□ -1.91
Trim58Q5NCC9 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Trim58Q5NCC9 Gm37063-201ENSMUST00000194678 3520 ntBASIC3.14□□□□□ -1.91
Trim58Q5NCC9 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Trim58Q5NCC9 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Trim58Q5NCC9 AC157570.1-201ENSMUST00000218052 3778 ntBASIC3.13□□□□□ -1.91
Trim58Q5NCC9 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Mir682-201ENSMUST00000102281 96 ntBASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Gm25563-201ENSMUST00000104603 74 ntBASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Gm13273-201ENSMUST00000119737 159 ntBASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Gm12770-201ENSMUST00000121734 462 ntBASIC3.13□□□□□ -1.91
Trim58Q5NCC9 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Gm23980-201ENSMUST00000157135 158 ntBASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Gm25373-201ENSMUST00000158156 115 ntBASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Gm23025-201ENSMUST00000158769 111 ntBASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Gm17054-201ENSMUST00000169811 259 ntBASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Mir7013-201ENSMUST00000183540 72 ntBASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Mir7k-201ENSMUST00000184115 110 ntBASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Mir7047-201ENSMUST00000184595 64 ntBASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Gm27477-201ENSMUST00000184649 143 ntBASIC3.13□□□□□ -1.91
Trim58Q5NCC9 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Gm18775-201ENSMUST00000190763 586 ntBASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Gm43115-201ENSMUST00000196244 160 ntBASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Gm43489-201ENSMUST00000196810 993 ntBASIC3.13□□□□□ -1.91
Trim58Q5NCC9 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Gm18414-201ENSMUST00000210858 694 ntBASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Gm45439-201ENSMUST00000211723 359 ntBASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC3.13□□□□□ -1.91
Trim58Q5NCC9 CR974485.1-201ENSMUST00000222408 402 ntBASIC3.13□□□□□ -1.91
Trim58Q5NCC9 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.13□□□□□ -1.91
Trim58Q5NCC9 AC158142.2-201ENSMUST00000227892 635 ntBASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Gm10038-201ENSMUST00000077233 441 ntBASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trim58Q5NCC9 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trim58Q5NCC9 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.13□□□□□ -1.91
Trim58Q5NCC9 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.12□□□□□ -1.91
Trim58Q5NCC9 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.12□□□□□ -1.91
Trim58Q5NCC9 Mir883a-201ENSMUST00000104824 76 ntBASIC3.12□□□□□ -1.91
Trim58Q5NCC9 Gm26247-201ENSMUST00000116702 91 ntBASIC3.12□□□□□ -1.91
Trim58Q5NCC9 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.12□□□□□ -1.91
Trim58Q5NCC9 Gm15176-201ENSMUST00000117734 135 ntBASIC3.12□□□□□ -1.91
Trim58Q5NCC9 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC3.12□□□□□ -1.91
Trim58Q5NCC9 Gm6574-201ENSMUST00000120037 362 ntBASIC3.12□□□□□ -1.91
Trim58Q5NCC9 Gm13720-201ENSMUST00000120741 196 ntBASIC3.12□□□□□ -1.91
Trim58Q5NCC9 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC3.12□□□□□ -1.91
Trim58Q5NCC9 Gm23648-201ENSMUST00000180301 107 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 127.4 ms