Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
PrkdcP97313 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
PrkdcP97313 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
PrkdcP97313 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC1□□□□□ -2.25
PrkdcP97313 Gm27921-201ENSMUST00000183968 108 ntBASIC1□□□□□ -2.25
PrkdcP97313 Gm37428-201ENSMUST00000193886 137 ntBASIC1□□□□□ -2.25
PrkdcP97313 Gm43865-201ENSMUST00000204721 127 ntBASIC1□□□□□ -2.25
PrkdcP97313 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
PrkdcP97313 Gm12985-201ENSMUST00000118376 183 ntBASIC1□□□□□ -2.25
PrkdcP97313 Gm43193-201ENSMUST00000197732 441 ntBASIC1□□□□□ -2.25
PrkdcP97313 Gm31532-201ENSMUST00000203555 767 ntBASIC1□□□□□ -2.25
PrkdcP97313 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1□□□□□ -2.25
PrkdcP97313 Gm13913-201ENSMUST00000121126 260 ntBASIC1□□□□□ -2.25
PrkdcP97313 Gm19932-201ENSMUST00000177033 313 ntBASIC1□□□□□ -2.25
PrkdcP97313 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1□□□□□ -2.25
PrkdcP97313 AC107369.1-201ENSMUST00000227373 860 ntBASIC1□□□□□ -2.25
PrkdcP97313 Gm43662-201ENSMUST00000198310 2271 ntBASIC1□□□□□ -2.25
PrkdcP97313 AC153526.2-201ENSMUST00000218206 2031 ntBASIC1□□□□□ -2.25
PrkdcP97313 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC1□□□□□ -2.25
PrkdcP97313 Mir878-201ENSMUST00000104680 78 ntBASIC1□□□□□ -2.25
PrkdcP97313 Gm22478-201ENSMUST00000122570 154 ntBASIC1□□□□□ -2.25
PrkdcP97313 Gm13194-201ENSMUST00000142299 311 ntBASIC1□□□□□ -2.25
PrkdcP97313 Gm26278-201ENSMUST00000157098 132 ntBASIC1□□□□□ -2.25
PrkdcP97313 Gm22431-201ENSMUST00000158545 107 ntBASIC1□□□□□ -2.25
PrkdcP97313 Gm22780-201ENSMUST00000104084 132 ntBASIC0.99□□□□□ -2.25
PrkdcP97313 Gm11438-201ENSMUST00000121582 189 ntBASIC0.99□□□□□ -2.25
PrkdcP97313 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC0.99□□□□□ -2.25
PrkdcP97313 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
PrkdcP97313 Gm18861-201ENSMUST00000202509 1186 ntBASIC0.99□□□□□ -2.25
PrkdcP97313 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC0.99□□□□□ -2.25
PrkdcP97313 AC122418.1-201ENSMUST00000225012 511 ntBASIC0.99□□□□□ -2.25
PrkdcP97313 AC168062.2-201ENSMUST00000228907 422 ntBASIC0.99□□□□□ -2.25
PrkdcP97313 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
PrkdcP97313 Gm15108-201ENSMUST00000116160 803 ntBASIC0.99□□□□□ -2.25
PrkdcP97313 Gm15111-201ENSMUST00000122142 878 ntBASIC0.99□□□□□ -2.25
PrkdcP97313 Gm8224-201ENSMUST00000166178 497 ntBASIC0.99□□□□□ -2.25
PrkdcP97313 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
PrkdcP97313 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
PrkdcP97313 Gm25080-201ENSMUST00000082526 107 ntBASIC0.99□□□□□ -2.25
PrkdcP97313 Gm24280-201ENSMUST00000104237 134 ntBASIC0.99□□□□□ -2.25
PrkdcP97313 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC0.99□□□□□ -2.25
PrkdcP97313 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
PrkdcP97313 Gm17065-201ENSMUST00000165245 239 ntBASIC0.98□□□□□ -2.25
PrkdcP97313 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
PrkdcP97313 Gm44578-201ENSMUST00000207236 3835 ntBASIC0.98□□□□□ -2.25
PrkdcP97313 Gm29809-201ENSMUST00000218423 493 ntBASIC0.98□□□□□ -2.25
PrkdcP97313 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC0.98□□□□□ -2.25
PrkdcP97313 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC0.98□□□□□ -2.25
PrkdcP97313 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC0.98□□□□□ -2.25
PrkdcP97313 Gm37290-201ENSMUST00000195775 339 ntBASIC0.98□□□□□ -2.25
PrkdcP97313 AC126267.1-201ENSMUST00000214282 284 ntBASIC0.98□□□□□ -2.25
PrkdcP97313 AC117588.2-201ENSMUST00000228340 311 ntBASIC0.98□□□□□ -2.25
PrkdcP97313 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
PrkdcP97313 Gm11357-201ENSMUST00000119758 954 ntBASIC0.98□□□□□ -2.25
PrkdcP97313 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
PrkdcP97313 Gm43954-201ENSMUST00000204634 544 ntBASIC0.98□□□□□ -2.25
PrkdcP97313 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
PrkdcP97313 Gm37778-201ENSMUST00000191732 190 ntBASIC0.97□□□□□ -2.25
PrkdcP97313 Gm43979-201ENSMUST00000203179 475 ntBASIC0.97□□□□□ -2.25
PrkdcP97313 Gm43978-201ENSMUST00000203491 451 ntBASIC0.97□□□□□ -2.25
PrkdcP97313 AC171206.1-201ENSMUST00000213612 213 ntBASIC0.97□□□□□ -2.25
PrkdcP97313 Snord104-201ENSMUST00000083192 70 ntBASIC0.97□□□□□ -2.25
PrkdcP97313 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
PrkdcP97313 Mir3096-201ENSMUST00000116685 71 ntBASIC0.97□□□□□ -2.25
PrkdcP97313 Gm23558-201ENSMUST00000157823 80 ntBASIC0.97□□□□□ -2.25
PrkdcP97313 Gm44478-201ENSMUST00000204875 114 ntBASIC0.97□□□□□ -2.25
PrkdcP97313 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC0.97□□□□□ -2.25
PrkdcP97313 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC0.97□□□□□ -2.25
PrkdcP97313 AC141884.1-201ENSMUST00000226327 636 ntBASIC0.97□□□□□ -2.25
PrkdcP97313 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
PrkdcP97313 Gm25768-201ENSMUST00000158570 98 ntBASIC0.97□□□□□ -2.25
PrkdcP97313 Gm3102-201ENSMUST00000164236 489 ntBASIC0.97□□□□□ -2.25
PrkdcP97313 Gm29281-201ENSMUST00000188077 381 ntBASIC0.97□□□□□ -2.25
PrkdcP97313 Gm28802-201ENSMUST00000188624 944 ntBASIC0.97□□□□□ -2.25
PrkdcP97313 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC0.97□□□□□ -2.25
PrkdcP97313 Gm43739-201ENSMUST00000198294 307 ntBASIC0.97□□□□□ -2.25
PrkdcP97313 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
PrkdcP97313 Gm43882-201ENSMUST00000204871 2264 ntBASIC0.96□□□□□ -2.25
PrkdcP97313 Gm15896-201ENSMUST00000118045 440 ntBASIC0.96□□□□□ -2.26
PrkdcP97313 Gm13640-201ENSMUST00000118445 264 ntBASIC0.96□□□□□ -2.26
PrkdcP97313 Gm26414-201ENSMUST00000157674 269 ntBASIC0.96□□□□□ -2.26
PrkdcP97313 Gm25247-201ENSMUST00000175475 90 ntBASIC0.96□□□□□ -2.26
PrkdcP97313 Gm3496-201ENSMUST00000188283 745 ntBASIC0.96□□□□□ -2.26
PrkdcP97313 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC0.96□□□□□ -2.26
PrkdcP97313 Gm44925-201ENSMUST00000208879 2110 ntBASIC0.96□□□□□ -2.26
PrkdcP97313 Mir423-201ENSMUST00000083584 109 ntBASIC0.96□□□□□ -2.26
PrkdcP97313 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC0.96□□□□□ -2.26
PrkdcP97313 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
PrkdcP97313 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
PrkdcP97313 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC0.96□□□□□ -2.26
PrkdcP97313 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
PrkdcP97313 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC0.96□□□□□ -2.26
PrkdcP97313 Gm23126-201ENSMUST00000104260 134 ntBASIC0.96□□□□□ -2.26
PrkdcP97313 Gm15161-201ENSMUST00000117340 387 ntBASIC0.96□□□□□ -2.26
PrkdcP97313 Gm12448-201ENSMUST00000118852 655 ntBASIC0.96□□□□□ -2.26
PrkdcP97313 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC0.96□□□□□ -2.26
PrkdcP97313 Gm26178-201ENSMUST00000177706 107 ntBASIC0.96□□□□□ -2.26
PrkdcP97313 Gm23151-201ENSMUST00000178061 107 ntBASIC0.96□□□□□ -2.26
PrkdcP97313 Gm44666-201ENSMUST00000208544 391 ntBASIC0.96□□□□□ -2.26
PrkdcP97313 n-R5s196-201ENSMUST00000083136 117 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 222.6 ms