Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm44125-201ENSMUST00000203068 448 ntBASIC4.77□□□□□ -1.65
Col18a1P39061 Gm45005-201ENSMUST00000206640 157 ntBASIC4.77□□□□□ -1.65
Col18a1P39061 Gm45678-201ENSMUST00000210509 295 ntBASIC4.77□□□□□ -1.65
Col18a1P39061 AC123618.1-201ENSMUST00000220174 360 ntBASIC4.77□□□□□ -1.65
Col18a1P39061 Gm5176-202ENSMUST00000220267 583 ntBASIC4.77□□□□□ -1.65
Col18a1P39061 Gm23296-201ENSMUST00000082555 107 ntBASIC4.77□□□□□ -1.65
Col18a1P39061 Gm24859-201ENSMUST00000082729 107 ntBASIC4.77□□□□□ -1.65
Col18a1P39061 Gm23447-201ENSMUST00000082798 163 ntBASIC4.77□□□□□ -1.65
Col18a1P39061 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.77□□□□□ -1.65
Col18a1P39061 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Col18a1P39061 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Col18a1P39061 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col18a1P39061 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.77□□□□□ -1.65
Col18a1P39061 Gm23792-201ENSMUST00000122557 93 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC4.76□□□□□ -1.65
Col18a1P39061 Snora81-201ENSMUST00000157310 178 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 Gm22597-201ENSMUST00000157602 80 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 Gm17072-201ENSMUST00000166673 658 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 Gm25071-201ENSMUST00000175232 70 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Col18a1P39061 Gm29218-205ENSMUST00000190846 615 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 Gm19726-201ENSMUST00000205008 240 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.76□□□□□ -1.65
Col18a1P39061 Gm18854-201ENSMUST00000211196 329 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 Gm46233-201ENSMUST00000217831 449 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 AC124537.1-201ENSMUST00000222890 159 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Col18a1P39061 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col18a1P39061 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col18a1P39061 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
Col18a1P39061 Gm37789-201ENSMUST00000192862 2889 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Col18a1P39061 Mir1198-201ENSMUST00000116995 121 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 Gm13046-201ENSMUST00000117391 501 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 Gm12230-201ENSMUST00000118301 454 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 Gm14581-201ENSMUST00000121726 198 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 Gm23779-201ENSMUST00000157938 64 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 Gm20630-201ENSMUST00000177387 551 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 Gm26430-201ENSMUST00000178054 107 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 Gm37575-201ENSMUST00000195467 309 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 Gm45023-201ENSMUST00000207951 379 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 Gm7407-201ENSMUST00000208301 568 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 AC124739.2-201ENSMUST00000222201 109 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC4.76□□□□□ -1.65
Col18a1P39061 Gm21937-201ENSMUST00000222825 218 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.76□□□□□ -1.65
Col18a1P39061 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col18a1P39061 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Col18a1P39061 Gm43718-201ENSMUST00000197524 1857 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col18a1P39061 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col18a1P39061 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Col18a1P39061 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Col18a1P39061 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.75□□□□□ -1.65
Col18a1P39061 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.75□□□□□ -1.65
Col18a1P39061 Gm14013-201ENSMUST00000119006 270 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Defa-ps12-201ENSMUST00000122353 193 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC4.75□□□□□ -1.65
Col18a1P39061 Gm16358-201ENSMUST00000146046 210 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm29512-201ENSMUST00000185544 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm28110-201ENSMUST00000185782 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm28838-201ENSMUST00000186338 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm29057-201ENSMUST00000186468 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm29661-201ENSMUST00000186781 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm28737-201ENSMUST00000186808 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm29118-201ENSMUST00000186908 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm28433-201ENSMUST00000187085 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm29635-201ENSMUST00000187221 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm28759-201ENSMUST00000187621 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm28831-201ENSMUST00000187739 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm28200-201ENSMUST00000187778 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm29026-201ENSMUST00000187787 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm28752-201ENSMUST00000188340 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm28797-201ENSMUST00000188543 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm28855-201ENSMUST00000188680 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm29378-201ENSMUST00000188723 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm28569-201ENSMUST00000188748 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm28120-201ENSMUST00000188812 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm28369-201ENSMUST00000188993 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm29037-201ENSMUST00000189092 313 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm28909-201ENSMUST00000189406 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm28705-201ENSMUST00000189548 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm28861-201ENSMUST00000189681 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm29180-201ENSMUST00000190003 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm28939-201ENSMUST00000190351 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm28223-201ENSMUST00000190469 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm29575-201ENSMUST00000190597 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm29092-201ENSMUST00000190768 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm29469-201ENSMUST00000191448 315 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Igkv13-76-201ENSMUST00000197621 347 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm45189-201ENSMUST00000208567 363 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 Gm17989-201ENSMUST00000211543 412 ntBASIC4.75□□□□□ -1.65
Col18a1P39061 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC4.75□□□□□ -1.65
Col18a1P39061 AC173115.1-201ENSMUST00000220835 211 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 143.2 ms