Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Col18a1P39061 Gm45879-201ENSMUST00000212521 392 ntBASIC4.81□□□□□ -1.64
Col18a1P39061 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col18a1P39061 AC125311.1-201ENSMUST00000226950 220 ntBASIC4.81□□□□□ -1.64
Col18a1P39061 Gm26206-201ENSMUST00000082908 110 ntBASIC4.81□□□□□ -1.64
Col18a1P39061 Gm22744-201ENSMUST00000083444 65 ntBASIC4.81□□□□□ -1.64
Col18a1P39061 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Col18a1P39061 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col18a1P39061 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col18a1P39061 Gm12053-201ENSMUST00000119022 252 ntBASIC4.8□□□□□ -1.64
Col18a1P39061 Gm22097-201ENSMUST00000157929 278 ntBASIC4.8□□□□□ -1.64
Col18a1P39061 Gm23775-201ENSMUST00000158991 249 ntBASIC4.8□□□□□ -1.64
Col18a1P39061 Gm29484-201ENSMUST00000186067 324 ntBASIC4.8□□□□□ -1.64
Col18a1P39061 AC130477.2-201ENSMUST00000228158 274 ntBASIC4.8□□□□□ -1.64
Col18a1P39061 Gm23927-201ENSMUST00000082466 215 ntBASIC4.8□□□□□ -1.64
Col18a1P39061 Gm25204-201ENSMUST00000082843 106 ntBASIC4.8□□□□□ -1.64
Col18a1P39061 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Col18a1P39061 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Col18a1P39061 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.79□□□□□ -1.64
Col18a1P39061 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Col18a1P39061 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col18a1P39061 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Col18a1P39061 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col18a1P39061 Gm37064-201ENSMUST00000193851 2231 ntBASIC4.79□□□□□ -1.64
Col18a1P39061 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Col18a1P39061 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Col18a1P39061 Gm13122-201ENSMUST00000118380 453 ntBASIC4.79□□□□□ -1.64
Col18a1P39061 Gm24875-201ENSMUST00000158888 104 ntBASIC4.79□□□□□ -1.64
Col18a1P39061 Mir3070b-201ENSMUST00000175205 89 ntBASIC4.79□□□□□ -1.64
Col18a1P39061 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col18a1P39061 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col18a1P39061 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Col18a1P39061 Snora70-201ENSMUST00000083047 137 ntBASIC4.79□□□□□ -1.64
Col18a1P39061 Mir129-2-201ENSMUST00000083577 90 ntBASIC4.79□□□□□ -1.64
Col18a1P39061 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Col18a1P39061 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col18a1P39061 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.79□□□□□ -1.64
Col18a1P39061 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Col18a1P39061 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Col18a1P39061 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Col18a1P39061 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col18a1P39061 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Col18a1P39061 Gm24889-201ENSMUST00000104388 132 ntBASIC4.78□□□□□ -1.64
Col18a1P39061 Gm23206-201ENSMUST00000122720 184 ntBASIC4.78□□□□□ -1.64
Col18a1P39061 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.78□□□□□ -1.64
Col18a1P39061 Gm23660-201ENSMUST00000178362 79 ntBASIC4.78□□□□□ -1.64
Col18a1P39061 Gm24088-201ENSMUST00000179100 79 ntBASIC4.78□□□□□ -1.64
Col18a1P39061 Gm23144-201ENSMUST00000180226 107 ntBASIC4.78□□□□□ -1.64
Col18a1P39061 Gm24306-201ENSMUST00000180229 79 ntBASIC4.78□□□□□ -1.64
Col18a1P39061 Gm23648-201ENSMUST00000180301 107 ntBASIC4.78□□□□□ -1.64
Col18a1P39061 Gm27540-201ENSMUST00000184950 187 ntBASIC4.78□□□□□ -1.64
Col18a1P39061 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Col18a1P39061 Gm28534-201ENSMUST00000187744 676 ntBASIC4.78□□□□□ -1.64
Col18a1P39061 AC171206.1-201ENSMUST00000213612 213 ntBASIC4.78□□□□□ -1.64
Col18a1P39061 AC165138.1-201ENSMUST00000226984 270 ntBASIC4.78□□□□□ -1.64
Col18a1P39061 Gm25081-201ENSMUST00000082534 108 ntBASIC4.78□□□□□ -1.64
Col18a1P39061 Gm26129-201ENSMUST00000082719 107 ntBASIC4.78□□□□□ -1.64
Col18a1P39061 Gm23506-201ENSMUST00000083077 107 ntBASIC4.78□□□□□ -1.64
Col18a1P39061 Gm23733-201ENSMUST00000083750 106 ntBASIC4.78□□□□□ -1.64
Col18a1P39061 Snord7-201ENSMUST00000083781 97 ntBASIC4.78□□□□□ -1.64
Col18a1P39061 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Col18a1P39061 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col18a1P39061 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Col18a1P39061 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Col18a1P39061 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Col18a1P39061 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Col18a1P39061 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col18a1P39061 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.78□□□□□ -1.64
Col18a1P39061 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC4.78□□□□□ -1.64
Col18a1P39061 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col18a1P39061 Mir1195-201ENSMUST00000116818 98 ntBASIC4.78□□□□□ -1.64
Col18a1P39061 Gm24289-201ENSMUST00000157629 135 ntBASIC4.78□□□□□ -1.64
Col18a1P39061 Gm25333-201ENSMUST00000158035 246 ntBASIC4.78□□□□□ -1.64
Col18a1P39061 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC4.78□□□□□ -1.64
Col18a1P39061 Gm22908-201ENSMUST00000177620 110 ntBASIC4.78□□□□□ -1.64
Col18a1P39061 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC4.78□□□□□ -1.64
Col18a1P39061 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC4.78□□□□□ -1.64
Col18a1P39061 Gm6303-201ENSMUST00000210123 471 ntBASIC4.78□□□□□ -1.64
Col18a1P39061 AC129541.1-201ENSMUST00000226940 523 ntBASIC4.78□□□□□ -1.64
Col18a1P39061 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Col18a1P39061 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col18a1P39061 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col18a1P39061 AC124561.2-201ENSMUST00000226657 1973 ntBASIC4.77□□□□□ -1.65
Col18a1P39061 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Col18a1P39061 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col18a1P39061 Gm14355-201ENSMUST00000117352 264 ntBASIC4.77□□□□□ -1.65
Col18a1P39061 Gm15180-201ENSMUST00000117745 492 ntBASIC4.77□□□□□ -1.65
Col18a1P39061 Gm6797-201ENSMUST00000119440 512 ntBASIC4.77□□□□□ -1.65
Col18a1P39061 Hba-ps4-201ENSMUST00000128900 447 ntBASIC4.77□□□□□ -1.65
Col18a1P39061 Gm14333-201ENSMUST00000130484 264 ntBASIC4.77□□□□□ -1.65
Col18a1P39061 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Col18a1P39061 Gm24019-201ENSMUST00000178620 107 ntBASIC4.77□□□□□ -1.65
Col18a1P39061 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Col18a1P39061 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Col18a1P39061 Gm26243-201ENSMUST00000179260 107 ntBASIC4.77□□□□□ -1.65
Col18a1P39061 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Col18a1P39061 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Col18a1P39061 Gm29192-201ENSMUST00000190942 377 ntBASIC4.77□□□□□ -1.65
Col18a1P39061 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC4.77□□□□□ -1.65
Col18a1P39061 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 136 ms