Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Gm43723-201ENSMUST00000196886 189 ntBASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC4.28□□□□□ -1.72
Brf1Q8CFK2 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC4.28□□□□□ -1.72
Brf1Q8CFK2 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Brf1Q8CFK2 AC187103.4-202ENSMUST00000225091 230 ntBASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Gm26263-201ENSMUST00000083281 164 ntBASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Brf1Q8CFK2 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Brf1Q8CFK2 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Brf1Q8CFK2 Gm14868-201ENSMUST00000117840 216 ntBASIC4.27□□□□□ -1.73
Brf1Q8CFK2 Gm14570-201ENSMUST00000119444 391 ntBASIC4.27□□□□□ -1.73
Brf1Q8CFK2 Gm13368-201ENSMUST00000122443 430 ntBASIC4.27□□□□□ -1.73
Brf1Q8CFK2 Gm22849-201ENSMUST00000157713 307 ntBASIC4.27□□□□□ -1.73
Brf1Q8CFK2 Gm22534-201ENSMUST00000158173 104 ntBASIC4.27□□□□□ -1.73
Brf1Q8CFK2 Gm20656-201ENSMUST00000176925 518 ntBASIC4.27□□□□□ -1.73
Brf1Q8CFK2 Gm8532-201ENSMUST00000179174 461 ntBASIC4.27□□□□□ -1.73
Brf1Q8CFK2 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC4.27□□□□□ -1.73
Brf1Q8CFK2 Mir6926-201ENSMUST00000184562 68 ntBASIC4.27□□□□□ -1.73
Brf1Q8CFK2 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Brf1Q8CFK2 Gm28724-201ENSMUST00000186149 625 ntBASIC4.27□□□□□ -1.73
Brf1Q8CFK2 Gm6947-201ENSMUST00000186254 78 ntBASIC4.27□□□□□ -1.73
Brf1Q8CFK2 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC4.27□□□□□ -1.73
Brf1Q8CFK2 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC4.27□□□□□ -1.73
Brf1Q8CFK2 AL450317.1-201ENSMUST00000213941 291 ntBASIC4.27□□□□□ -1.73
Brf1Q8CFK2 AC134420.1-201ENSMUST00000227027 289 ntBASIC4.27□□□□□ -1.73
Brf1Q8CFK2 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Brf1Q8CFK2 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC4.27□□□□□ -1.73
Brf1Q8CFK2 Gm40020-201ENSMUST00000215677 1635 ntBASIC4.27□□□□□ -1.73
Brf1Q8CFK2 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Brf1Q8CFK2 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Brf1Q8CFK2 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Brf1Q8CFK2 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Brf1Q8CFK2 Gm12255-201ENSMUST00000117184 284 ntBASIC4.26□□□□□ -1.73
Brf1Q8CFK2 Gm11408-201ENSMUST00000117889 519 ntBASIC4.26□□□□□ -1.73
Brf1Q8CFK2 Gm11859-201ENSMUST00000118099 455 ntBASIC4.26□□□□□ -1.73
Brf1Q8CFK2 Gm13737-201ENSMUST00000119793 232 ntBASIC4.26□□□□□ -1.73
Brf1Q8CFK2 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.26□□□□□ -1.73
Brf1Q8CFK2 Gm12872-201ENSMUST00000121835 320 ntBASIC4.26□□□□□ -1.73
Brf1Q8CFK2 Gm26045-201ENSMUST00000157862 97 ntBASIC4.26□□□□□ -1.73
Brf1Q8CFK2 Gm24192-201ENSMUST00000157978 145 ntBASIC4.26□□□□□ -1.73
Brf1Q8CFK2 Gm25860-201ENSMUST00000158252 126 ntBASIC4.26□□□□□ -1.73
Brf1Q8CFK2 Gm24876-201ENSMUST00000158780 92 ntBASIC4.26□□□□□ -1.73
Brf1Q8CFK2 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC4.26□□□□□ -1.73
Brf1Q8CFK2 Snord116l14-201ENSMUST00000179875 94 ntBASIC4.26□□□□□ -1.73
Brf1Q8CFK2 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC4.26□□□□□ -1.73
Brf1Q8CFK2 Gm10105-201ENSMUST00000184601 270 ntBASIC4.26□□□□□ -1.73
Brf1Q8CFK2 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC4.26□□□□□ -1.73
Brf1Q8CFK2 Gm17990-201ENSMUST00000211728 553 ntBASIC4.26□□□□□ -1.73
Brf1Q8CFK2 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC4.26□□□□□ -1.73
Brf1Q8CFK2 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Brf1Q8CFK2 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.26□□□□□ -1.73
Brf1Q8CFK2 CT485612.2-201ENSMUST00000223014 151 ntBASIC4.26□□□□□ -1.73
Brf1Q8CFK2 AC167669.1-201ENSMUST00000224932 384 ntBASIC4.26□□□□□ -1.73
Brf1Q8CFK2 AC117656.1-201ENSMUST00000225826 339 ntBASIC4.26□□□□□ -1.73
Brf1Q8CFK2 AC122393.3-201ENSMUST00000226343 1059 ntBASIC4.26□□□□□ -1.73
Brf1Q8CFK2 AC183096.1-201ENSMUST00000226392 130 ntBASIC4.26□□□□□ -1.73
Brf1Q8CFK2 AC172751.1-201ENSMUST00000226887 440 ntBASIC4.26□□□□□ -1.73
Brf1Q8CFK2 Gm25592-201ENSMUST00000082635 131 ntBASIC4.26□□□□□ -1.73
Brf1Q8CFK2 Gm25579-201ENSMUST00000083407 106 ntBASIC4.26□□□□□ -1.73
Brf1Q8CFK2 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Brf1Q8CFK2 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Brf1Q8CFK2 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Brf1Q8CFK2 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Brf1Q8CFK2 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Brf1Q8CFK2 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Brf1Q8CFK2 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.25□□□□□ -1.73
Brf1Q8CFK2 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Brf1Q8CFK2 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Brf1Q8CFK2 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Brf1Q8CFK2 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC4.25□□□□□ -1.73
Brf1Q8CFK2 Gm12722-201ENSMUST00000118507 493 ntBASIC4.25□□□□□ -1.73
Brf1Q8CFK2 Gm12137-201ENSMUST00000119565 346 ntBASIC4.25□□□□□ -1.73
Brf1Q8CFK2 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC4.25□□□□□ -1.73
Brf1Q8CFK2 Gm25456-201ENSMUST00000157952 109 ntBASIC4.25□□□□□ -1.73
Brf1Q8CFK2 Gm25438-201ENSMUST00000158281 110 ntBASIC4.25□□□□□ -1.73
Brf1Q8CFK2 Gm25397-201ENSMUST00000176951 92 ntBASIC4.25□□□□□ -1.73
Brf1Q8CFK2 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC4.25□□□□□ -1.73
Brf1Q8CFK2 Gm19637-201ENSMUST00000185933 579 ntBASIC4.25□□□□□ -1.73
Brf1Q8CFK2 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC4.25□□□□□ -1.73
Brf1Q8CFK2 Gm28069-201ENSMUST00000189926 214 ntBASIC4.25□□□□□ -1.73
Brf1Q8CFK2 Gm7182-201ENSMUST00000193351 732 ntBASIC4.25□□□□□ -1.73
Brf1Q8CFK2 Gm37889-201ENSMUST00000194174 251 ntBASIC4.25□□□□□ -1.73
Brf1Q8CFK2 Gm44041-201ENSMUST00000203678 396 ntBASIC4.25□□□□□ -1.73
Brf1Q8CFK2 Gm44060-201ENSMUST00000204440 410 ntBASIC4.25□□□□□ -1.73
Brf1Q8CFK2 Gm44870-201ENSMUST00000207291 357 ntBASIC4.25□□□□□ -1.73
Brf1Q8CFK2 AC132465.3-201ENSMUST00000219326 195 ntBASIC4.25□□□□□ -1.73
Brf1Q8CFK2 AC166358.7-201ENSMUST00000221132 108 ntBASIC4.25□□□□□ -1.73
Brf1Q8CFK2 AC125543.5-201ENSMUST00000222799 108 ntBASIC4.25□□□□□ -1.73
Brf1Q8CFK2 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 205.7 ms