Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm42805-201ENSMUST00000196158 276 ntBASIC3.2□□□□□ -1.9
Trim58Q5NCC9 Gm44254-201ENSMUST00000204184 322 ntBASIC3.2□□□□□ -1.9
Trim58Q5NCC9 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC3.2□□□□□ -1.9
Trim58Q5NCC9 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.2□□□□□ -1.9
Trim58Q5NCC9 Gm19563-201ENSMUST00000222031 270 ntBASIC3.2□□□□□ -1.9
Trim58Q5NCC9 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trim58Q5NCC9 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trim58Q5NCC9 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trim58Q5NCC9 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trim58Q5NCC9 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC3.2□□□□□ -1.9
Trim58Q5NCC9 Gm14445-201ENSMUST00000117051 1484 ntBASIC3.2□□□□□ -1.9
Trim58Q5NCC9 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trim58Q5NCC9 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trim58Q5NCC9 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Trim58Q5NCC9 Mir592-201ENSMUST00000102113 96 ntBASIC3.19□□□□□ -1.9
Trim58Q5NCC9 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC3.19□□□□□ -1.9
Trim58Q5NCC9 Gm14880-201ENSMUST00000117581 292 ntBASIC3.19□□□□□ -1.9
Trim58Q5NCC9 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC3.19□□□□□ -1.9
Trim58Q5NCC9 Mir3965-201ENSMUST00000175570 69 ntBASIC3.19□□□□□ -1.9
Trim58Q5NCC9 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC3.19□□□□□ -1.9
Trim58Q5NCC9 Gm25874-201ENSMUST00000178030 79 ntBASIC3.19□□□□□ -1.9
Trim58Q5NCC9 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.19□□□□□ -1.9
Trim58Q5NCC9 Gm28356-202ENSMUST00000187566 858 ntBASIC3.19□□□□□ -1.9
Trim58Q5NCC9 Gm43245-201ENSMUST00000197603 468 ntBASIC3.19□□□□□ -1.9
Trim58Q5NCC9 Gm42828-201ENSMUST00000199669 469 ntBASIC3.19□□□□□ -1.9
Trim58Q5NCC9 Gm44990-201ENSMUST00000203922 217 ntBASIC3.19□□□□□ -1.9
Trim58Q5NCC9 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC3.19□□□□□ -1.9
Trim58Q5NCC9 Gm18015-201ENSMUST00000214879 316 ntBASIC3.19□□□□□ -1.9
Trim58Q5NCC9 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC3.19□□□□□ -1.9
Trim58Q5NCC9 AC192334.2-201ENSMUST00000223087 1091 ntBASIC3.19□□□□□ -1.9
Trim58Q5NCC9 Gm25126-201ENSMUST00000083343 102 ntBASIC3.19□□□□□ -1.9
Trim58Q5NCC9 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Trim58Q5NCC9 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trim58Q5NCC9 Gm8675-201ENSMUST00000201408 1856 ntBASIC3.19□□□□□ -1.9
Trim58Q5NCC9 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trim58Q5NCC9 Gm7133-201ENSMUST00000187797 2039 ntBASIC3.19□□□□□ -1.9
Trim58Q5NCC9 Gm3563-201ENSMUST00000172963 1628 ntBASIC3.19□□□□□ -1.9
Trim58Q5NCC9 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trim58Q5NCC9 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trim58Q5NCC9 Gm45872-201ENSMUST00000209804 1584 ntBASIC3.18□□□□□ -1.9
Trim58Q5NCC9 Gm11268-201ENSMUST00000118347 267 ntBASIC3.18□□□□□ -1.9
Trim58Q5NCC9 Gm14945-201ENSMUST00000119556 1118 ntBASIC3.18□□□□□ -1.9
Trim58Q5NCC9 Gm22849-201ENSMUST00000157713 307 ntBASIC3.18□□□□□ -1.9
Trim58Q5NCC9 Gm23223-201ENSMUST00000158119 127 ntBASIC3.18□□□□□ -1.9
Trim58Q5NCC9 Gm26406-201ENSMUST00000158503 124 ntBASIC3.18□□□□□ -1.9
Trim58Q5NCC9 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC3.18□□□□□ -1.9
Trim58Q5NCC9 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC3.18□□□□□ -1.9
Trim58Q5NCC9 Gm27676-201ENSMUST00000183669 61 ntBASIC3.18□□□□□ -1.9
Trim58Q5NCC9 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trim58Q5NCC9 Gm29263-201ENSMUST00000188718 463 ntBASIC3.18□□□□□ -1.9
Trim58Q5NCC9 Gm28437-201ENSMUST00000190277 783 ntBASIC3.18□□□□□ -1.9
Trim58Q5NCC9 Trbv12-3-201ENSMUST00000192675 372 ntBASIC3.18□□□□□ -1.9
Trim58Q5NCC9 Gm37641-201ENSMUST00000193837 239 ntBASIC3.18□□□□□ -1.9
Trim58Q5NCC9 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.18□□□□□ -1.9
Trim58Q5NCC9 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Trim58Q5NCC9 Gm45146-201ENSMUST00000207108 221 ntBASIC3.18□□□□□ -1.9
Trim58Q5NCC9 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.18□□□□□ -1.9
Trim58Q5NCC9 AC154532.2-201ENSMUST00000228947 598 ntBASIC3.18□□□□□ -1.9
Trim58Q5NCC9 Gm22249-201ENSMUST00000082485 136 ntBASIC3.18□□□□□ -1.9
Trim58Q5NCC9 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trim58Q5NCC9 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.18□□□□□ -1.9
Trim58Q5NCC9 Gm37664-201ENSMUST00000194607 3813 ntBASIC3.18□□□□□ -1.9
Trim58Q5NCC9 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm24670-201ENSMUST00000104154 132 ntBASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm12598-201ENSMUST00000117333 830 ntBASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm2005-201ENSMUST00000120759 542 ntBASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm16021-201ENSMUST00000121176 219 ntBASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm22538-201ENSMUST00000158169 299 ntBASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm22766-201ENSMUST00000158372 99 ntBASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm3111-201ENSMUST00000167426 490 ntBASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Mir6386-201ENSMUST00000183558 104 ntBASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm27379-201ENSMUST00000183730 123 ntBASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm27249-201ENSMUST00000185049 328 ntBASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm29299-201ENSMUST00000185609 923 ntBASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 144.9 ms