Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Igkv13-64-201ENSMUST00000198143 343 ntBASIC1.14□□□□□ -2.23
PrkdcP97313 Gm9375-201ENSMUST00000208899 903 ntBASIC1.14□□□□□ -2.23
PrkdcP97313 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC1.14□□□□□ -2.23
PrkdcP97313 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.14□□□□□ -2.23
PrkdcP97313 Gm6923-201ENSMUST00000118343 406 ntBASIC1.14□□□□□ -2.23
PrkdcP97313 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.14□□□□□ -2.23
PrkdcP97313 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC1.14□□□□□ -2.23
PrkdcP97313 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
PrkdcP97313 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
PrkdcP97313 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
PrkdcP97313 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
PrkdcP97313 Gm25728-201ENSMUST00000104525 159 ntBASIC1.13□□□□□ -2.23
PrkdcP97313 n-R5s52-201ENSMUST00000104614 113 ntBASIC1.13□□□□□ -2.23
PrkdcP97313 Gm14559-201ENSMUST00000121745 496 ntBASIC1.13□□□□□ -2.23
PrkdcP97313 Gm23328-201ENSMUST00000157418 132 ntBASIC1.13□□□□□ -2.23
PrkdcP97313 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.13□□□□□ -2.23
PrkdcP97313 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC1.13□□□□□ -2.23
PrkdcP97313 Gm7209-201ENSMUST00000122339 333 ntBASIC1.13□□□□□ -2.23
PrkdcP97313 Gm23385-201ENSMUST00000158592 295 ntBASIC1.13□□□□□ -2.23
PrkdcP97313 Gm22116-201ENSMUST00000158791 141 ntBASIC1.13□□□□□ -2.23
PrkdcP97313 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
PrkdcP97313 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC1.13□□□□□ -2.23
PrkdcP97313 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC1.13□□□□□ -2.23
PrkdcP97313 Gm28745-201ENSMUST00000190069 305 ntBASIC1.13□□□□□ -2.23
PrkdcP97313 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC1.13□□□□□ -2.23
PrkdcP97313 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC1.13□□□□□ -2.23
PrkdcP97313 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC1.13□□□□□ -2.23
PrkdcP97313 Gm5646-201ENSMUST00000120568 714 ntBASIC1.13□□□□□ -2.23
PrkdcP97313 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC1.13□□□□□ -2.23
PrkdcP97313 Mir7663-201ENSMUST00000183950 61 ntBASIC1.13□□□□□ -2.23
PrkdcP97313 Gm28060-201ENSMUST00000191554 189 ntBASIC1.13□□□□□ -2.23
PrkdcP97313 Gm7171-201ENSMUST00000177413 1349 ntBASIC1.13□□□□□ -2.23
PrkdcP97313 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC1.13□□□□□ -2.23
PrkdcP97313 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
PrkdcP97313 Gm25555-201ENSMUST00000158078 111 ntBASIC1.13□□□□□ -2.23
PrkdcP97313 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC1.13□□□□□ -2.23
PrkdcP97313 AC154426.1-201ENSMUST00000225614 1132 ntBASIC1.13□□□□□ -2.23
PrkdcP97313 Gm24406-201ENSMUST00000083026 128 ntBASIC1.13□□□□□ -2.23
PrkdcP97313 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
PrkdcP97313 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
PrkdcP97313 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
PrkdcP97313 Gm23991-201ENSMUST00000117033 93 ntBASIC1.12□□□□□ -2.23
PrkdcP97313 Gm13614-201ENSMUST00000117306 503 ntBASIC1.12□□□□□ -2.23
PrkdcP97313 Gm25365-201ENSMUST00000158852 121 ntBASIC1.12□□□□□ -2.23
PrkdcP97313 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC1.12□□□□□ -2.23
PrkdcP97313 CT571256.1-201ENSMUST00000226045 585 ntBASIC1.12□□□□□ -2.23
PrkdcP97313 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.12□□□□□ -2.23
PrkdcP97313 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
PrkdcP97313 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
PrkdcP97313 Gm11577-201ENSMUST00000118030 737 ntBASIC1.12□□□□□ -2.23
PrkdcP97313 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC1.12□□□□□ -2.23
PrkdcP97313 Gm44462-201ENSMUST00000199696 129 ntBASIC1.12□□□□□ -2.23
PrkdcP97313 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC1.12□□□□□ -2.23
PrkdcP97313 AC159263.3-201ENSMUST00000223434 460 ntBASIC1.12□□□□□ -2.23
PrkdcP97313 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
PrkdcP97313 Gm25409-201ENSMUST00000083764 131 ntBASIC1.12□□□□□ -2.23
PrkdcP97313 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.12□□□□□ -2.23
PrkdcP97313 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
PrkdcP97313 Gm24690-201ENSMUST00000157759 97 ntBASIC1.12□□□□□ -2.23
PrkdcP97313 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
PrkdcP97313 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
PrkdcP97313 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.12□□□□□ -2.23
PrkdcP97313 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
PrkdcP97313 Gm9785-202ENSMUST00000144563 593 ntBASIC1.11□□□□□ -2.23
PrkdcP97313 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.11□□□□□ -2.23
PrkdcP97313 AC147639.1-201ENSMUST00000224216 661 ntBASIC1.11□□□□□ -2.23
PrkdcP97313 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
PrkdcP97313 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
PrkdcP97313 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.11□□□□□ -2.23
PrkdcP97313 Gm25806-201ENSMUST00000122782 122 ntBASIC1.11□□□□□ -2.23
PrkdcP97313 Gm24863-201ENSMUST00000179499 107 ntBASIC1.11□□□□□ -2.23
PrkdcP97313 Gm28383-201ENSMUST00000187563 139 ntBASIC1.11□□□□□ -2.23
PrkdcP97313 Gm29262-201ENSMUST00000190084 196 ntBASIC1.11□□□□□ -2.23
PrkdcP97313 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.11□□□□□ -2.23
PrkdcP97313 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.11□□□□□ -2.23
PrkdcP97313 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
PrkdcP97313 Gm22304-201ENSMUST00000082688 129 ntBASIC1.11□□□□□ -2.23
PrkdcP97313 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
PrkdcP97313 Gm38278-201ENSMUST00000194715 1365 ntBASIC1.11□□□□□ -2.23
PrkdcP97313 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.1□□□□□ -2.23
PrkdcP97313 Mir3106-201ENSMUST00000175401 82 ntBASIC1.1□□□□□ -2.23
PrkdcP97313 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
PrkdcP97313 Gm44555-201ENSMUST00000209008 148 ntBASIC1.1□□□□□ -2.23
PrkdcP97313 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
PrkdcP97313 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
PrkdcP97313 Gm23183-201ENSMUST00000122595 323 ntBASIC1.1□□□□□ -2.23
PrkdcP97313 Gm25106-201ENSMUST00000122672 134 ntBASIC1.1□□□□□ -2.23
PrkdcP97313 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC1.1□□□□□ -2.23
PrkdcP97313 Gm6788-201ENSMUST00000166459 270 ntBASIC1.1□□□□□ -2.23
PrkdcP97313 Gm19427-201ENSMUST00000183619 208 ntBASIC1.1□□□□□ -2.23
PrkdcP97313 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC1.1□□□□□ -2.23
PrkdcP97313 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC1.1□□□□□ -2.23
PrkdcP97313 AC151843.1-201ENSMUST00000215960 691 ntBASIC1.1□□□□□ -2.23
PrkdcP97313 Gm18188-201ENSMUST00000219386 478 ntBASIC1.1□□□□□ -2.23
PrkdcP97313 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC1.1□□□□□ -2.23
PrkdcP97313 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.1□□□□□ -2.23
PrkdcP97313 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
PrkdcP97313 Gm44133-202ENSMUST00000204450 2586 ntBASIC1.1□□□□□ -2.23
PrkdcP97313 Gm23585-201ENSMUST00000157656 102 ntBASIC1.1□□□□□ -2.23
PrkdcP97313 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 131 ms