Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col18a1P39061 Gm25563-201ENSMUST00000104603 74 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.86□□□□□ -1.63
Col18a1P39061 Gm23124-201ENSMUST00000157650 107 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 Gm22968-201ENSMUST00000157955 118 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 Gm22311-201ENSMUST00000158006 110 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 Gm23197-201ENSMUST00000158809 112 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 Mir5128-201ENSMUST00000175217 84 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 Gm28506-201ENSMUST00000189937 150 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 Gm4322-201ENSMUST00000191094 336 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 Gm43286-201ENSMUST00000197420 424 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 Gm44419-201ENSMUST00000203338 229 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 Gm44964-201ENSMUST00000207011 273 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 Gm45590-201ENSMUST00000209715 262 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 AC091783.4-201ENSMUST00000224940 611 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 AC122393.3-201ENSMUST00000226343 1059 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col18a1P39061 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Col18a1P39061 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col18a1P39061 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col18a1P39061 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col18a1P39061 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col18a1P39061 Gm15088-201ENSMUST00000117973 1508 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 Gm15098-201ENSMUST00000119036 1508 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 Gm43831-201ENSMUST00000200461 2598 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 Gm43300-201ENSMUST00000198540 2043 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col18a1P39061 Mir875-201ENSMUST00000104698 78 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 Mir3103-201ENSMUST00000175474 67 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC4.86□□□□□ -1.63
Col18a1P39061 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC4.86□□□□□ -1.63
Col18a1P39061 Gm7837-201ENSMUST00000190873 412 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 Gm44371-201ENSMUST00000204148 467 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 Gm45742-201ENSMUST00000212400 433 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 AC100590.2-201ENSMUST00000219028 215 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 AC153564.2-201ENSMUST00000219464 273 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 AC161254.1-201ENSMUST00000220310 3842 ntBASIC4.86□□□□□ -1.63
Col18a1P39061 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Col18a1P39061 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Col18a1P39061 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col18a1P39061 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Col18a1P39061 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Col18a1P39061 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Col18a1P39061 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Col18a1P39061 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col18a1P39061 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col18a1P39061 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Col18a1P39061 Gm11576-201ENSMUST00000117433 417 ntBASIC4.85□□□□□ -1.63
Col18a1P39061 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC4.85□□□□□ -1.63
Col18a1P39061 Mup-ps21-201ENSMUST00000119998 448 ntBASIC4.85□□□□□ -1.63
Col18a1P39061 Gm11384-201ENSMUST00000121376 303 ntBASIC4.85□□□□□ -1.63
Col18a1P39061 Gm11344-201ENSMUST00000122011 335 ntBASIC4.85□□□□□ -1.63
Col18a1P39061 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC4.85□□□□□ -1.63
Col18a1P39061 Gm24504-201ENSMUST00000157679 100 ntBASIC4.85□□□□□ -1.63
Col18a1P39061 Gm23380-201ENSMUST00000158448 103 ntBASIC4.85□□□□□ -1.63
Col18a1P39061 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Col18a1P39061 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC4.85□□□□□ -1.63
Col18a1P39061 Gm44922-201ENSMUST00000206690 90 ntBASIC4.85□□□□□ -1.63
Col18a1P39061 Gm45049-201ENSMUST00000207586 591 ntBASIC4.85□□□□□ -1.63
Col18a1P39061 Gm35857-201ENSMUST00000212739 178 ntBASIC4.85□□□□□ -1.63
Col18a1P39061 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col18a1P39061 Gm24446-201ENSMUST00000083982 156 ntBASIC4.85□□□□□ -1.63
Col18a1P39061 Olfr203-201ENSMUST00000089305 924 ntBASIC4.85□□□□□ -1.63
Col18a1P39061 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col18a1P39061 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col18a1P39061 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Col18a1P39061 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Col18a1P39061 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.84□□□□□ -1.63
Col18a1P39061 Ear-ps4-201ENSMUST00000166834 450 ntBASIC4.84□□□□□ -1.63
Col18a1P39061 Gm24618-201ENSMUST00000177718 94 ntBASIC4.84□□□□□ -1.63
Col18a1P39061 Gm23953-201ENSMUST00000178214 94 ntBASIC4.84□□□□□ -1.63
Col18a1P39061 Gm26332-201ENSMUST00000179813 94 ntBASIC4.84□□□□□ -1.63
Col18a1P39061 Gm22863-201ENSMUST00000180265 94 ntBASIC4.84□□□□□ -1.63
Col18a1P39061 Gm29014-201ENSMUST00000191422 326 ntBASIC4.84□□□□□ -1.63
Col18a1P39061 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC4.84□□□□□ -1.63
Col18a1P39061 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC4.84□□□□□ -1.63
Col18a1P39061 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC4.84□□□□□ -1.63
Col18a1P39061 AC113031.4-201ENSMUST00000228381 514 ntBASIC4.84□□□□□ -1.63
Col18a1P39061 Gm38264-201ENSMUST00000194850 2032 ntBASIC4.84□□□□□ -1.63
Col18a1P39061 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.84□□□□□ -1.63
Col18a1P39061 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col18a1P39061 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
Col18a1P39061 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col18a1P39061 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Col18a1P39061 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Col18a1P39061 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Col18a1P39061 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.84□□□□□ -1.64
Col18a1P39061 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Col18a1P39061 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col18a1P39061 Gm14811-201ENSMUST00000117070 117 ntBASIC4.83□□□□□ -1.64
Col18a1P39061 Gm22910-201ENSMUST00000178568 132 ntBASIC4.83□□□□□ -1.64
Col18a1P39061 Gm8600-201ENSMUST00000186320 905 ntBASIC4.83□□□□□ -1.64
Col18a1P39061 Gm37698-201ENSMUST00000192605 463 ntBASIC4.83□□□□□ -1.64
Col18a1P39061 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.83□□□□□ -1.64
Col18a1P39061 Gm44403-201ENSMUST00000198554 129 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 161.5 ms