Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 AC132881.2-201ENSMUST00000225474 709 ntBASIC1.18□□□□□ -2.22
PrkdcP97313 AC158142.2-201ENSMUST00000227892 635 ntBASIC1.18□□□□□ -2.22
PrkdcP97313 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
PrkdcP97313 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
PrkdcP97313 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
PrkdcP97313 Gm12230-201ENSMUST00000118301 454 ntBASIC1.17□□□□□ -2.22
PrkdcP97313 Gm25945-201ENSMUST00000122484 135 ntBASIC1.17□□□□□ -2.22
PrkdcP97313 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
PrkdcP97313 CT025552.1-201ENSMUST00000224561 521 ntBASIC1.17□□□□□ -2.22
PrkdcP97313 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
PrkdcP97313 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
PrkdcP97313 Gm11556-201ENSMUST00000120751 288 ntBASIC1.17□□□□□ -2.22
PrkdcP97313 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC1.17□□□□□ -2.22
PrkdcP97313 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
PrkdcP97313 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC1.17□□□□□ -2.22
PrkdcP97313 Gm19761-201ENSMUST00000205372 391 ntBASIC1.17□□□□□ -2.22
PrkdcP97313 AC157570.3-201ENSMUST00000219281 205 ntBASIC1.17□□□□□ -2.22
PrkdcP97313 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC1.17□□□□□ -2.22
PrkdcP97313 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC1.17□□□□□ -2.22
PrkdcP97313 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
PrkdcP97313 Gm13024-201ENSMUST00000121756 718 ntBASIC1.17□□□□□ -2.22
PrkdcP97313 Gm24465-201ENSMUST00000178398 107 ntBASIC1.17□□□□□ -2.22
PrkdcP97313 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC1.17□□□□□ -2.22
PrkdcP97313 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC1.17□□□□□ -2.22
PrkdcP97313 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC1.17□□□□□ -2.22
PrkdcP97313 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.17□□□□□ -2.22
PrkdcP97313 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
PrkdcP97313 n-R5s220-201ENSMUST00000082926 120 ntBASIC1.17□□□□□ -2.22
PrkdcP97313 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
PrkdcP97313 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC1.17□□□□□ -2.22
PrkdcP97313 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC1.17□□□□□ -2.22
PrkdcP97313 Gm14229-201ENSMUST00000121178 850 ntBASIC1.17□□□□□ -2.22
PrkdcP97313 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC1.17□□□□□ -2.22
PrkdcP97313 Gm26406-201ENSMUST00000158503 124 ntBASIC1.17□□□□□ -2.22
PrkdcP97313 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC1.17□□□□□ -2.22
PrkdcP97313 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
PrkdcP97313 Gm17872-201ENSMUST00000222550 532 ntBASIC1.17□□□□□ -2.22
PrkdcP97313 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.17□□□□□ -2.22
PrkdcP97313 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
PrkdcP97313 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC1.17□□□□□ -2.22
PrkdcP97313 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.17□□□□□ -2.22
PrkdcP97313 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC1.16□□□□□ -2.22
PrkdcP97313 Gm13627-201ENSMUST00000119700 706 ntBASIC1.16□□□□□ -2.22
PrkdcP97313 Gm22565-201ENSMUST00000175540 69 ntBASIC1.16□□□□□ -2.22
PrkdcP97313 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
PrkdcP97313 Mir7016-201ENSMUST00000184308 72 ntBASIC1.16□□□□□ -2.22
PrkdcP97313 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.16□□□□□ -2.22
PrkdcP97313 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.16□□□□□ -2.22
PrkdcP97313 Gm43659-201ENSMUST00000200894 628 ntBASIC1.16□□□□□ -2.22
PrkdcP97313 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC1.16□□□□□ -2.22
PrkdcP97313 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC1.16□□□□□ -2.22
PrkdcP97313 Gm45577-201ENSMUST00000210206 2287 ntBASIC1.16□□□□□ -2.22
PrkdcP97313 Gm14923-201ENSMUST00000118270 155 ntBASIC1.16□□□□□ -2.22
PrkdcP97313 Gm22416-201ENSMUST00000158590 88 ntBASIC1.16□□□□□ -2.22
PrkdcP97313 Gm25119-201ENSMUST00000158815 88 ntBASIC1.16□□□□□ -2.22
PrkdcP97313 Gm24174-201ENSMUST00000158933 111 ntBASIC1.16□□□□□ -2.22
PrkdcP97313 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
PrkdcP97313 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
PrkdcP97313 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC1.16□□□□□ -2.22
PrkdcP97313 AC121598.3-201ENSMUST00000227179 1643 ntBASIC1.16□□□□□ -2.22
PrkdcP97313 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
PrkdcP97313 Gm23329-201ENSMUST00000157415 108 ntBASIC1.16□□□□□ -2.22
PrkdcP97313 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
PrkdcP97313 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.16□□□□□ -2.22
PrkdcP97313 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC1.16□□□□□ -2.22
PrkdcP97313 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC1.16□□□□□ -2.22
PrkdcP97313 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
PrkdcP97313 Gm25038-201ENSMUST00000082928 130 ntBASIC1.16□□□□□ -2.22
PrkdcP97313 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
PrkdcP97313 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.15□□□□□ -2.22
PrkdcP97313 Mir320-201ENSMUST00000083594 82 ntBASIC1.15□□□□□ -2.22
PrkdcP97313 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.15□□□□□ -2.22
PrkdcP97313 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
PrkdcP97313 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
PrkdcP97313 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC1.15□□□□□ -2.23
PrkdcP97313 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
PrkdcP97313 Gm13273-201ENSMUST00000119737 159 ntBASIC1.15□□□□□ -2.23
PrkdcP97313 Gm14876-201ENSMUST00000120795 327 ntBASIC1.15□□□□□ -2.23
PrkdcP97313 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
PrkdcP97313 Gm25883-201ENSMUST00000157781 271 ntBASIC1.15□□□□□ -2.23
PrkdcP97313 Gm22858-201ENSMUST00000174972 76 ntBASIC1.15□□□□□ -2.23
PrkdcP97313 Gm6651-201ENSMUST00000189471 271 ntBASIC1.15□□□□□ -2.23
PrkdcP97313 Gm6012-201ENSMUST00000210821 730 ntBASIC1.15□□□□□ -2.23
PrkdcP97313 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.15□□□□□ -2.23
PrkdcP97313 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
PrkdcP97313 Olfr815-201ENSMUST00000071557 951 ntBASIC1.15□□□□□ -2.23
PrkdcP97313 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
PrkdcP97313 Gm25787-201ENSMUST00000104709 92 ntBASIC1.15□□□□□ -2.23
PrkdcP97313 Gm12782-201ENSMUST00000117519 727 ntBASIC1.15□□□□□ -2.23
PrkdcP97313 Gm14867-201ENSMUST00000120156 866 ntBASIC1.15□□□□□ -2.23
PrkdcP97313 Gm13743-201ENSMUST00000121486 724 ntBASIC1.15□□□□□ -2.23
PrkdcP97313 Gm13419-201ENSMUST00000121711 271 ntBASIC1.15□□□□□ -2.23
PrkdcP97313 Gm25715-201ENSMUST00000158627 125 ntBASIC1.15□□□□□ -2.23
PrkdcP97313 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
PrkdcP97313 Gm12765-201ENSMUST00000117273 615 ntBASIC1.14□□□□□ -2.23
PrkdcP97313 Gm25051-201ENSMUST00000158602 249 ntBASIC1.14□□□□□ -2.23
PrkdcP97313 Gm27580-201ENSMUST00000183666 149 ntBASIC1.14□□□□□ -2.23
PrkdcP97313 AC154506.1-201ENSMUST00000225178 621 ntBASIC1.14□□□□□ -2.23
PrkdcP97313 CT025525.1-201ENSMUST00000226325 1054 ntBASIC1.14□□□□□ -2.23
PrkdcP97313 Gm13868-201ENSMUST00000122411 294 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 234.4 ms