Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm14794-201ENSMUST00000118181 192 ntBASIC2.28□□□□□ -2.05
Col4a4Q9QZR9 Gm12935-201ENSMUST00000119352 246 ntBASIC2.28□□□□□ -2.05
Col4a4Q9QZR9 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC2.28□□□□□ -2.05
Col4a4Q9QZR9 Gm16533-201ENSMUST00000140035 228 ntBASIC2.28□□□□□ -2.05
Col4a4Q9QZR9 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
Col4a4Q9QZR9 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
Col4a4Q9QZR9 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC2.28□□□□□ -2.05
Col4a4Q9QZR9 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
Col4a4Q9QZR9 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.28□□□□□ -2.05
Col4a4Q9QZR9 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC2.28□□□□□ -2.05
Col4a4Q9QZR9 Gm44988-201ENSMUST00000203835 1161 ntBASIC2.28□□□□□ -2.05
Col4a4Q9QZR9 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC2.28□□□□□ -2.05
Col4a4Q9QZR9 AC127302.1-201ENSMUST00000215973 1111 ntBASIC2.28□□□□□ -2.05
Col4a4Q9QZR9 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.28□□□□□ -2.05
Col4a4Q9QZR9 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
Col4a4Q9QZR9 AC159297.2-201ENSMUST00000219567 1075 ntBASIC2.28□□□□□ -2.05
Col4a4Q9QZR9 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC2.28□□□□□ -2.05
Col4a4Q9QZR9 AC116589.9-201ENSMUST00000221462 908 ntBASIC2.28□□□□□ -2.05
Col4a4Q9QZR9 AC134468.2-201ENSMUST00000222549 672 ntBASIC2.28□□□□□ -2.05
Col4a4Q9QZR9 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.28□□□□□ -2.05
Col4a4Q9QZR9 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.28□□□□□ -2.05
Col4a4Q9QZR9 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
Col4a4Q9QZR9 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC2.28□□□□□ -2.05
Col4a4Q9QZR9 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
Col4a4Q9QZR9 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC2.28□□□□□ -2.05
Col4a4Q9QZR9 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Col4a4Q9QZR9 Gm44438-201ENSMUST00000204388 3236 ntBASIC2.27□□□□□ -2.05
Col4a4Q9QZR9 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Col4a4Q9QZR9 Gm24889-201ENSMUST00000104388 132 ntBASIC2.27□□□□□ -2.05
Col4a4Q9QZR9 Gm22149-201ENSMUST00000104442 136 ntBASIC2.27□□□□□ -2.05
Col4a4Q9QZR9 Gm14877-201ENSMUST00000119803 478 ntBASIC2.27□□□□□ -2.05
Col4a4Q9QZR9 Gm11876-201ENSMUST00000120002 269 ntBASIC2.27□□□□□ -2.05
Col4a4Q9QZR9 Gm12515-201ENSMUST00000120116 361 ntBASIC2.27□□□□□ -2.05
Col4a4Q9QZR9 Gm11835-201ENSMUST00000120635 663 ntBASIC2.27□□□□□ -2.05
Col4a4Q9QZR9 Gm11797-201ENSMUST00000121336 754 ntBASIC2.27□□□□□ -2.05
Col4a4Q9QZR9 Gm13471-201ENSMUST00000122057 433 ntBASIC2.27□□□□□ -2.05
Col4a4Q9QZR9 Gm23234-201ENSMUST00000157304 134 ntBASIC2.27□□□□□ -2.05
Col4a4Q9QZR9 Gm25557-201ENSMUST00000158084 315 ntBASIC2.27□□□□□ -2.05
Col4a4Q9QZR9 Gm22517-201ENSMUST00000158265 136 ntBASIC2.27□□□□□ -2.05
Col4a4Q9QZR9 Gm23005-201ENSMUST00000158950 136 ntBASIC2.27□□□□□ -2.05
Col4a4Q9QZR9 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Col4a4Q9QZR9 Gm29513-201ENSMUST00000185741 202 ntBASIC2.27□□□□□ -2.05
Col4a4Q9QZR9 Gm29516-201ENSMUST00000190402 468 ntBASIC2.27□□□□□ -2.05
Col4a4Q9QZR9 Gm6615-201ENSMUST00000199426 631 ntBASIC2.27□□□□□ -2.05
Col4a4Q9QZR9 AC113305.1-201ENSMUST00000214664 724 ntBASIC2.27□□□□□ -2.05
Col4a4Q9QZR9 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.27□□□□□ -2.05
Col4a4Q9QZR9 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.27□□□□□ -2.05
Col4a4Q9QZR9 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC2.27□□□□□ -2.05
Col4a4Q9QZR9 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Col4a4Q9QZR9 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Col4a4Q9QZR9 AC154681.1-201ENSMUST00000225876 1735 ntBASIC2.27□□□□□ -2.05
Col4a4Q9QZR9 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Col4a4Q9QZR9 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
Col4a4Q9QZR9 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Col4a4Q9QZR9 Gm13228-201ENSMUST00000118937 634 ntBASIC2.26□□□□□ -2.05
Col4a4Q9QZR9 Gm23387-201ENSMUST00000158586 107 ntBASIC2.26□□□□□ -2.05
Col4a4Q9QZR9 Gm25488-201ENSMUST00000158728 118 ntBASIC2.26□□□□□ -2.05
Col4a4Q9QZR9 Gm17061-201ENSMUST00000163167 499 ntBASIC2.26□□□□□ -2.05
Col4a4Q9QZR9 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Col4a4Q9QZR9 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC2.26□□□□□ -2.05
Col4a4Q9QZR9 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC2.26□□□□□ -2.05
Col4a4Q9QZR9 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC2.26□□□□□ -2.05
Col4a4Q9QZR9 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC2.26□□□□□ -2.05
Col4a4Q9QZR9 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
Col4a4Q9QZR9 Gm37098-201ENSMUST00000192290 244 ntBASIC2.26□□□□□ -2.05
Col4a4Q9QZR9 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC2.26□□□□□ -2.05
Col4a4Q9QZR9 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.26□□□□□ -2.05
Col4a4Q9QZR9 AC158392.1-201ENSMUST00000223720 1069 ntBASIC2.26□□□□□ -2.05
Col4a4Q9QZR9 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Col4a4Q9QZR9 Gm5583-201ENSMUST00000174328 1519 ntBASIC2.26□□□□□ -2.05
Col4a4Q9QZR9 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
Col4a4Q9QZR9 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Col4a4Q9QZR9 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
Col4a4Q9QZR9 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
Col4a4Q9QZR9 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Col4a4Q9QZR9 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.25□□□□□ -2.05
Col4a4Q9QZR9 Gm6806-201ENSMUST00000120092 1006 ntBASIC2.25□□□□□ -2.05
Col4a4Q9QZR9 Gm12313-201ENSMUST00000121347 421 ntBASIC2.25□□□□□ -2.05
Col4a4Q9QZR9 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Col4a4Q9QZR9 Gm22339-201ENSMUST00000157718 62 ntBASIC2.25□□□□□ -2.05
Col4a4Q9QZR9 Gm24960-201ENSMUST00000157923 90 ntBASIC2.25□□□□□ -2.05
Col4a4Q9QZR9 Gm26024-201ENSMUST00000158657 322 ntBASIC2.25□□□□□ -2.05
Col4a4Q9QZR9 Gm23819-201ENSMUST00000158744 109 ntBASIC2.25□□□□□ -2.05
Col4a4Q9QZR9 Gm25836-201ENSMUST00000158918 123 ntBASIC2.25□□□□□ -2.05
Col4a4Q9QZR9 Ear-ps12-201ENSMUST00000161720 451 ntBASIC2.25□□□□□ -2.05
Col4a4Q9QZR9 Gm17164-201ENSMUST00000169013 506 ntBASIC2.25□□□□□ -2.05
Col4a4Q9QZR9 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC2.25□□□□□ -2.05
Col4a4Q9QZR9 Mir6352-201ENSMUST00000184495 116 ntBASIC2.25□□□□□ -2.05
Col4a4Q9QZR9 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Col4a4Q9QZR9 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Col4a4Q9QZR9 Gm19257-201ENSMUST00000186121 183 ntBASIC2.25□□□□□ -2.05
Col4a4Q9QZR9 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Col4a4Q9QZR9 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Col4a4Q9QZR9 Gm28623-201ENSMUST00000187219 192 ntBASIC2.25□□□□□ -2.05
Col4a4Q9QZR9 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC2.25□□□□□ -2.05
Col4a4Q9QZR9 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Col4a4Q9QZR9 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Col4a4Q9QZR9 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC2.25□□□□□ -2.05
Col4a4Q9QZR9 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.25□□□□□ -2.05
Col4a4Q9QZR9 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC2.25□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 135.8 ms