Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 AC122464.1-201ENSMUST00000202789 770 ntBASIC1.22□□□□□ -2.21
PrkdcP97313 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.22□□□□□ -2.21
PrkdcP97313 Gm26072-201ENSMUST00000083135 107 ntBASIC1.22□□□□□ -2.21
PrkdcP97313 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
PrkdcP97313 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
PrkdcP97313 Gm23708-201ENSMUST00000104367 123 ntBASIC1.22□□□□□ -2.21
PrkdcP97313 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC1.22□□□□□ -2.21
PrkdcP97313 Gm17946-201ENSMUST00000186856 538 ntBASIC1.22□□□□□ -2.21
PrkdcP97313 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
PrkdcP97313 Gm11876-201ENSMUST00000120002 269 ntBASIC1.22□□□□□ -2.21
PrkdcP97313 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
PrkdcP97313 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC1.22□□□□□ -2.21
PrkdcP97313 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.22□□□□□ -2.21
PrkdcP97313 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC1.22□□□□□ -2.21
PrkdcP97313 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
PrkdcP97313 Gm22494-201ENSMUST00000104495 128 ntBASIC1.21□□□□□ -2.21
PrkdcP97313 Gm15115-201ENSMUST00000121145 264 ntBASIC1.21□□□□□ -2.21
PrkdcP97313 Gm13409-201ENSMUST00000122072 546 ntBASIC1.21□□□□□ -2.21
PrkdcP97313 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC1.21□□□□□ -2.22
PrkdcP97313 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
PrkdcP97313 Gm23015-201ENSMUST00000104145 128 ntBASIC1.21□□□□□ -2.22
PrkdcP97313 Gm15087-201ENSMUST00000117465 1172 ntBASIC1.21□□□□□ -2.22
PrkdcP97313 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.21□□□□□ -2.22
PrkdcP97313 Gm37616-201ENSMUST00000193974 322 ntBASIC1.21□□□□□ -2.22
PrkdcP97313 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.21□□□□□ -2.22
PrkdcP97313 Gm44358-201ENSMUST00000196301 98 ntBASIC1.21□□□□□ -2.22
PrkdcP97313 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.21□□□□□ -2.22
PrkdcP97313 Gm37407-201ENSMUST00000194793 1316 ntBASIC1.21□□□□□ -2.22
PrkdcP97313 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
PrkdcP97313 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
PrkdcP97313 Gm23642-201ENSMUST00000157858 258 ntBASIC1.21□□□□□ -2.22
PrkdcP97313 Gm22108-201ENSMUST00000177961 106 ntBASIC1.21□□□□□ -2.22
PrkdcP97313 Gm24798-201ENSMUST00000179334 106 ntBASIC1.21□□□□□ -2.22
PrkdcP97313 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.21□□□□□ -2.22
PrkdcP97313 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.21□□□□□ -2.22
PrkdcP97313 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
PrkdcP97313 Mir219b-201ENSMUST00000198317 65 ntBASIC1.21□□□□□ -2.22
PrkdcP97313 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC1.21□□□□□ -2.22
PrkdcP97313 AC192088.2-201ENSMUST00000227590 411 ntBASIC1.21□□□□□ -2.22
PrkdcP97313 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
PrkdcP97313 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC1.21□□□□□ -2.22
PrkdcP97313 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
PrkdcP97313 Gm23008-201ENSMUST00000158946 80 ntBASIC1.21□□□□□ -2.22
PrkdcP97313 Gm23636-201ENSMUST00000175070 95 ntBASIC1.21□□□□□ -2.22
PrkdcP97313 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
PrkdcP97313 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
PrkdcP97313 AC101984.1-201ENSMUST00000219639 402 ntBASIC1.2□□□□□ -2.22
PrkdcP97313 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
PrkdcP97313 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.2□□□□□ -2.22
PrkdcP97313 BC051076-202ENSMUST00000199477 2868 ntBASIC1.2□□□□□ -2.22
PrkdcP97313 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
PrkdcP97313 Gm13457-201ENSMUST00000117885 267 ntBASIC1.2□□□□□ -2.22
PrkdcP97313 Gm22083-201ENSMUST00000157586 102 ntBASIC1.2□□□□□ -2.22
PrkdcP97313 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
PrkdcP97313 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
PrkdcP97313 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
PrkdcP97313 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
PrkdcP97313 Gm23336-201ENSMUST00000117023 123 ntBASIC1.2□□□□□ -2.22
PrkdcP97313 Gm15106-201ENSMUST00000119691 821 ntBASIC1.2□□□□□ -2.22
PrkdcP97313 Gm16326-201ENSMUST00000162843 414 ntBASIC1.2□□□□□ -2.22
PrkdcP97313 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC1.2□□□□□ -2.22
PrkdcP97313 AC140254.1-201ENSMUST00000220063 331 ntBASIC1.2□□□□□ -2.22
PrkdcP97313 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
PrkdcP97313 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
PrkdcP97313 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
PrkdcP97313 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
PrkdcP97313 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC1.2□□□□□ -2.22
PrkdcP97313 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
PrkdcP97313 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
PrkdcP97313 Gm38332-201ENSMUST00000194189 147 ntBASIC1.19□□□□□ -2.22
PrkdcP97313 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.19□□□□□ -2.22
PrkdcP97313 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.19□□□□□ -2.22
PrkdcP97313 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.19□□□□□ -2.22
PrkdcP97313 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.19□□□□□ -2.22
PrkdcP97313 Gm11268-201ENSMUST00000118347 267 ntBASIC1.19□□□□□ -2.22
PrkdcP97313 Gm13487-201ENSMUST00000122240 864 ntBASIC1.19□□□□□ -2.22
PrkdcP97313 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC1.19□□□□□ -2.22
PrkdcP97313 Gm42834-201ENSMUST00000196845 256 ntBASIC1.19□□□□□ -2.22
PrkdcP97313 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC1.19□□□□□ -2.22
PrkdcP97313 AC109172.1-201ENSMUST00000227503 187 ntBASIC1.19□□□□□ -2.22
PrkdcP97313 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
PrkdcP97313 Gm43582-201ENSMUST00000196149 343 ntBASIC1.19□□□□□ -2.22
PrkdcP97313 Gm8679-201ENSMUST00000210651 1036 ntBASIC1.19□□□□□ -2.22
PrkdcP97313 AC154270.1-201ENSMUST00000227226 426 ntBASIC1.19□□□□□ -2.22
PrkdcP97313 Gm25124-201ENSMUST00000083345 164 ntBASIC1.19□□□□□ -2.22
PrkdcP97313 Gm20679-201ENSMUST00000177285 1402 ntBASIC1.19□□□□□ -2.22
PrkdcP97313 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.19□□□□□ -2.22
PrkdcP97313 Gm25901-201ENSMUST00000158494 130 ntBASIC1.18□□□□□ -2.22
PrkdcP97313 Gm5471-201ENSMUST00000072732 337 ntBASIC1.18□□□□□ -2.22
PrkdcP97313 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
PrkdcP97313 Snord71-201ENSMUST00000104361 85 ntBASIC1.18□□□□□ -2.22
PrkdcP97313 Gm13510-201ENSMUST00000118659 429 ntBASIC1.18□□□□□ -2.22
PrkdcP97313 Gm23702-201ENSMUST00000158840 130 ntBASIC1.18□□□□□ -2.22
PrkdcP97313 Gm42465-201ENSMUST00000197036 492 ntBASIC1.18□□□□□ -2.22
PrkdcP97313 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
PrkdcP97313 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC1.18□□□□□ -2.22
PrkdcP97313 Gm25958-201ENSMUST00000175114 71 ntBASIC1.18□□□□□ -2.22
PrkdcP97313 Gm19791-201ENSMUST00000180398 859 ntBASIC1.18□□□□□ -2.22
PrkdcP97313 Gm27656-201ENSMUST00000185055 80 ntBASIC1.18□□□□□ -2.22
PrkdcP97313 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC1.18□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 123.2 ms