Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Trim58Q5NCC9 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Trim58Q5NCC9 Gm24241-201ENSMUST00000157787 145 ntBASIC3.33□□□□□ -1.88
Trim58Q5NCC9 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.33□□□□□ -1.88
Trim58Q5NCC9 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Trim58Q5NCC9 Gm23145-201ENSMUST00000178912 79 ntBASIC3.33□□□□□ -1.88
Trim58Q5NCC9 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.33□□□□□ -1.88
Trim58Q5NCC9 Gm29658-201ENSMUST00000185404 230 ntBASIC3.33□□□□□ -1.88
Trim58Q5NCC9 Gm23128-202ENSMUST00000196578 133 ntBASIC3.33□□□□□ -1.88
Trim58Q5NCC9 Gm9375-201ENSMUST00000208899 903 ntBASIC3.33□□□□□ -1.88
Trim58Q5NCC9 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.33□□□□□ -1.88
Trim58Q5NCC9 CT030704.1-201ENSMUST00000227521 699 ntBASIC3.33□□□□□ -1.88
Trim58Q5NCC9 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Trim58Q5NCC9 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trim58Q5NCC9 Gm23939-201ENSMUST00000082880 133 ntBASIC3.33□□□□□ -1.88
Trim58Q5NCC9 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Trim58Q5NCC9 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Trim58Q5NCC9 Gm44708-201ENSMUST00000205580 2237 ntBASIC3.33□□□□□ -1.88
Trim58Q5NCC9 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trim58Q5NCC9 Gm23691-201ENSMUST00000101878 107 ntBASIC3.32□□□□□ -1.88
Trim58Q5NCC9 Gm12393-201ENSMUST00000117084 848 ntBASIC3.32□□□□□ -1.88
Trim58Q5NCC9 Gm11577-201ENSMUST00000118030 737 ntBASIC3.32□□□□□ -1.88
Trim58Q5NCC9 Gm14794-201ENSMUST00000118181 192 ntBASIC3.32□□□□□ -1.88
Trim58Q5NCC9 Gm12607-201ENSMUST00000120724 493 ntBASIC3.32□□□□□ -1.88
Trim58Q5NCC9 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Trim58Q5NCC9 Mup-ps2-201ENSMUST00000142602 533 ntBASIC3.32□□□□□ -1.88
Trim58Q5NCC9 Gm16331-201ENSMUST00000144274 498 ntBASIC3.32□□□□□ -1.88
Trim58Q5NCC9 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim58Q5NCC9 Gm28412-201ENSMUST00000187243 177 ntBASIC3.32□□□□□ -1.88
Trim58Q5NCC9 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.32□□□□□ -1.88
Trim58Q5NCC9 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC3.32□□□□□ -1.88
Trim58Q5NCC9 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC3.32□□□□□ -1.88
Trim58Q5NCC9 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC3.32□□□□□ -1.88
Trim58Q5NCC9 Gm19620-201ENSMUST00000195972 434 ntBASIC3.32□□□□□ -1.88
Trim58Q5NCC9 Gm43070-201ENSMUST00000196938 415 ntBASIC3.32□□□□□ -1.88
Trim58Q5NCC9 Gm6615-201ENSMUST00000199426 631 ntBASIC3.32□□□□□ -1.88
Trim58Q5NCC9 Gm18268-201ENSMUST00000208445 943 ntBASIC3.32□□□□□ -1.88
Trim58Q5NCC9 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC3.32□□□□□ -1.88
Trim58Q5NCC9 Gm46136-201ENSMUST00000214730 565 ntBASIC3.32□□□□□ -1.88
Trim58Q5NCC9 Gm35262-201ENSMUST00000215133 267 ntBASIC3.32□□□□□ -1.88
Trim58Q5NCC9 AC166358.6-201ENSMUST00000221834 1206 ntBASIC3.32□□□□□ -1.88
Trim58Q5NCC9 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC3.32□□□□□ -1.88
Trim58Q5NCC9 AC144733.1-201ENSMUST00000222893 1289 ntBASIC3.32□□□□□ -1.88
Trim58Q5NCC9 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.32□□□□□ -1.88
Trim58Q5NCC9 AC117814.1-201ENSMUST00000226135 352 ntBASIC3.32□□□□□ -1.88
Trim58Q5NCC9 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.32□□□□□ -1.88
Trim58Q5NCC9 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim58Q5NCC9 Gm42483-201ENSMUST00000197556 1742 ntBASIC3.32□□□□□ -1.88
Trim58Q5NCC9 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trim58Q5NCC9 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.32□□□□□ -1.88
Trim58Q5NCC9 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Gm43498-201ENSMUST00000202002 1486 ntBASIC3.31□□□□□ -1.88
Trim58Q5NCC9 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Gm17132-201ENSMUST00000109542 1158 ntBASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Gm14469-201ENSMUST00000118363 202 ntBASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Gm14577-201ENSMUST00000121134 256 ntBASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Snrpert-201ENSMUST00000121967 279 ntBASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Gm26027-201ENSMUST00000122725 268 ntBASIC3.31□□□□□ -1.88
Trim58Q5NCC9 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Gm18448-201ENSMUST00000186286 599 ntBASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Gm38311-201ENSMUST00000192945 165 ntBASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Gm37979-201ENSMUST00000193065 712 ntBASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Gm43582-201ENSMUST00000196149 343 ntBASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Gm44526-201ENSMUST00000204664 121 ntBASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Trim58Q5NCC9 AC153957.1-201ENSMUST00000215235 229 ntBASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Gm18225-201ENSMUST00000216708 742 ntBASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC3.31□□□□□ -1.88
Trim58Q5NCC9 AC121844.1-201ENSMUST00000218706 137 ntBASIC3.31□□□□□ -1.88
Trim58Q5NCC9 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC3.31□□□□□ -1.88
Trim58Q5NCC9 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.31□□□□□ -1.88
Trim58Q5NCC9 CT025157.1-201ENSMUST00000226241 292 ntBASIC3.31□□□□□ -1.88
Trim58Q5NCC9 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Gm26439-201ENSMUST00000082592 106 ntBASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Gm38706-201ENSMUST00000182397 2617 ntBASIC3.31□□□□□ -1.88
Trim58Q5NCC9 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trim58Q5NCC9 Gm44789-201ENSMUST00000207195 3101 ntBASIC3.3□□□□□ -1.88
Trim58Q5NCC9 Gm22591-201ENSMUST00000104243 106 ntBASIC3.3□□□□□ -1.88
Trim58Q5NCC9 Gm26341-201ENSMUST00000104561 134 ntBASIC3.3□□□□□ -1.88
Trim58Q5NCC9 Gm7974-201ENSMUST00000117154 408 ntBASIC3.3□□□□□ -1.88
Trim58Q5NCC9 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC3.3□□□□□ -1.88
Trim58Q5NCC9 Gm13443-201ENSMUST00000120770 555 ntBASIC3.3□□□□□ -1.88
Trim58Q5NCC9 Gm12096-201ENSMUST00000121149 829 ntBASIC3.3□□□□□ -1.88
Trim58Q5NCC9 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC3.3□□□□□ -1.88
Trim58Q5NCC9 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC3.3□□□□□ -1.88
Trim58Q5NCC9 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC3.3□□□□□ -1.88
Trim58Q5NCC9 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trim58Q5NCC9 Gm28552-201ENSMUST00000190725 388 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 173.2 ms