Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Gm13603-201ENSMUST00000119404 83 ntBASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Gm12495-201ENSMUST00000119750 447 ntBASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Gm13574-201ENSMUST00000120482 394 ntBASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Gm12748-201ENSMUST00000120763 504 ntBASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Gm23470-201ENSMUST00000157129 120 ntBASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC3.36□□□□□ -1.87
Trim58Q5NCC9 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Mir8103-201ENSMUST00000183945 107 ntBASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Gm18667-201ENSMUST00000186523 484 ntBASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Gm29597-201ENSMUST00000188035 308 ntBASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Gm37807-201ENSMUST00000194310 190 ntBASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Gm34701-202ENSMUST00000204685 360 ntBASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC3.36□□□□□ -1.87
Trim58Q5NCC9 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Trim58Q5NCC9 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trim58Q5NCC9 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.36□□□□□ -1.87
Trim58Q5NCC9 AC154506.3-201ENSMUST00000225417 213 ntBASIC3.36□□□□□ -1.87
Trim58Q5NCC9 AC125350.4-201ENSMUST00000225895 273 ntBASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trim58Q5NCC9 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Gm25582-201ENSMUST00000083412 110 ntBASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trim58Q5NCC9 Mir582-201ENSMUST00000103758 81 ntBASIC3.35□□□□□ -1.87
Trim58Q5NCC9 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC3.35□□□□□ -1.87
Trim58Q5NCC9 Gm14607-201ENSMUST00000119119 491 ntBASIC3.35□□□□□ -1.87
Trim58Q5NCC9 Gm6664-201ENSMUST00000119138 468 ntBASIC3.35□□□□□ -1.87
Trim58Q5NCC9 Gm15452-201ENSMUST00000119877 240 ntBASIC3.35□□□□□ -1.87
Trim58Q5NCC9 Gm11414-201ENSMUST00000121795 263 ntBASIC3.35□□□□□ -1.87
Trim58Q5NCC9 Gm25883-201ENSMUST00000157781 271 ntBASIC3.35□□□□□ -1.87
Trim58Q5NCC9 Gm25490-201ENSMUST00000158734 130 ntBASIC3.35□□□□□ -1.87
Trim58Q5NCC9 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC3.35□□□□□ -1.87
Trim58Q5NCC9 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trim58Q5NCC9 Gm22858-201ENSMUST00000174972 76 ntBASIC3.35□□□□□ -1.87
Trim58Q5NCC9 Gm18727-201ENSMUST00000185981 553 ntBASIC3.35□□□□□ -1.87
Trim58Q5NCC9 Gm3010-201ENSMUST00000198805 448 ntBASIC3.35□□□□□ -1.87
Trim58Q5NCC9 Gm34314-201ENSMUST00000203622 367 ntBASIC3.35□□□□□ -1.87
Trim58Q5NCC9 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.35□□□□□ -1.87
Trim58Q5NCC9 Gm18346-201ENSMUST00000216782 325 ntBASIC3.35□□□□□ -1.87
Trim58Q5NCC9 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trim58Q5NCC9 AC120540.1-201ENSMUST00000221879 324 ntBASIC3.35□□□□□ -1.87
Trim58Q5NCC9 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trim58Q5NCC9 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trim58Q5NCC9 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trim58Q5NCC9 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Trim58Q5NCC9 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Gm14517-201ENSMUST00000119040 337 ntBASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Gm15111-201ENSMUST00000122142 878 ntBASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Gm22208-201ENSMUST00000122658 110 ntBASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Gm26411-201ENSMUST00000157668 107 ntBASIC3.34□□□□□ -1.87
Trim58Q5NCC9 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Gm17030-201ENSMUST00000167016 393 ntBASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Gm19203-201ENSMUST00000174049 939 ntBASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Gm25748-201ENSMUST00000175487 70 ntBASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Gm25528-201ENSMUST00000180264 132 ntBASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Gm27428-201ENSMUST00000184289 110 ntBASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Gm27760-201ENSMUST00000185048 114 ntBASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Gm29073-201ENSMUST00000185563 664 ntBASIC3.34□□□□□ -1.87
Trim58Q5NCC9 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Gm29165-201ENSMUST00000190655 664 ntBASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Gm29211-201ENSMUST00000191470 664 ntBASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Gm37946-201ENSMUST00000192064 347 ntBASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Gm44060-201ENSMUST00000204440 410 ntBASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Gm44903-201ENSMUST00000206840 130 ntBASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Gm18410-201ENSMUST00000207199 577 ntBASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Gm45912-201ENSMUST00000210646 543 ntBASIC3.34□□□□□ -1.87
Trim58Q5NCC9 CT030184.1-201ENSMUST00000222393 416 ntBASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.34□□□□□ -1.87
Trim58Q5NCC9 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.34□□□□□ -1.88
Trim58Q5NCC9 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Trim58Q5NCC9 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.33□□□□□ -1.88
Trim58Q5NCC9 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trim58Q5NCC9 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.33□□□□□ -1.88
Trim58Q5NCC9 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trim58Q5NCC9 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Trim58Q5NCC9 Gm23128-201ENSMUST00000104257 132 ntBASIC3.33□□□□□ -1.88
Trim58Q5NCC9 Gm22497-201ENSMUST00000104499 131 ntBASIC3.33□□□□□ -1.88
Trim58Q5NCC9 Mir466n-201ENSMUST00000104798 94 ntBASIC3.33□□□□□ -1.88
Trim58Q5NCC9 Gm14518-201ENSMUST00000117351 542 ntBASIC3.33□□□□□ -1.88
Trim58Q5NCC9 Gm14845-201ENSMUST00000121259 306 ntBASIC3.33□□□□□ -1.88
Trim58Q5NCC9 Gm22026-201ENSMUST00000122735 281 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 151.4 ms