Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Col18a1P39061 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col18a1P39061 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col18a1P39061 Gm24068-201ENSMUST00000104513 132 ntBASIC4.99□□□□□ -1.61
Col18a1P39061 Gm13170-201ENSMUST00000119716 643 ntBASIC4.99□□□□□ -1.61
Col18a1P39061 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col18a1P39061 Gm24138-201ENSMUST00000157572 114 ntBASIC4.99□□□□□ -1.61
Col18a1P39061 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
Col18a1P39061 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC4.99□□□□□ -1.61
Col18a1P39061 Gm43739-201ENSMUST00000198294 307 ntBASIC4.99□□□□□ -1.61
Col18a1P39061 CT030166.2-201ENSMUST00000222021 368 ntBASIC4.99□□□□□ -1.61
Col18a1P39061 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC4.99□□□□□ -1.61
Col18a1P39061 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC4.99□□□□□ -1.61
Col18a1P39061 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC4.99□□□□□ -1.61
Col18a1P39061 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
Col18a1P39061 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col18a1P39061 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col18a1P39061 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.99□□□□□ -1.61
Col18a1P39061 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col18a1P39061 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Col18a1P39061 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Col18a1P39061 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Col18a1P39061 Gm11673-201ENSMUST00000117846 331 ntBASIC4.99□□□□□ -1.61
Col18a1P39061 Gm13831-201ENSMUST00000118764 302 ntBASIC4.99□□□□□ -1.61
Col18a1P39061 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col18a1P39061 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col18a1P39061 Gm25669-201ENSMUST00000157699 112 ntBASIC4.99□□□□□ -1.61
Col18a1P39061 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Col18a1P39061 Gm25670-201ENSMUST00000178423 107 ntBASIC4.99□□□□□ -1.61
Col18a1P39061 Gm26239-201ENSMUST00000178842 107 ntBASIC4.99□□□□□ -1.61
Col18a1P39061 Gm24267-201ENSMUST00000179841 107 ntBASIC4.99□□□□□ -1.61
Col18a1P39061 Gm9318-201ENSMUST00000222444 438 ntBASIC4.99□□□□□ -1.61
Col18a1P39061 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col18a1P39061 Gm24292-201ENSMUST00000082888 107 ntBASIC4.99□□□□□ -1.61
Col18a1P39061 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Col18a1P39061 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Col18a1P39061 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col18a1P39061 Gm37879-201ENSMUST00000193112 1995 ntBASIC4.98□□□□□ -1.61
Col18a1P39061 AC153729.4-201ENSMUST00000217582 3826 ntBASIC4.98□□□□□ -1.61
Col18a1P39061 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col18a1P39061 Gm13788-201ENSMUST00000120767 601 ntBASIC4.98□□□□□ -1.61
Col18a1P39061 Gm15267-201ENSMUST00000120888 464 ntBASIC4.98□□□□□ -1.61
Col18a1P39061 Gm25873-201ENSMUST00000180317 107 ntBASIC4.98□□□□□ -1.61
Col18a1P39061 Gm28358-202ENSMUST00000189292 223 ntBASIC4.98□□□□□ -1.61
Col18a1P39061 Gm42570-201ENSMUST00000195937 292 ntBASIC4.98□□□□□ -1.61
Col18a1P39061 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.98□□□□□ -1.61
Col18a1P39061 AC122188.1-201ENSMUST00000217534 312 ntBASIC4.98□□□□□ -1.61
Col18a1P39061 AC167229.1-201ENSMUST00000220057 469 ntBASIC4.98□□□□□ -1.61
Col18a1P39061 AC126554.1-201ENSMUST00000222161 271 ntBASIC4.98□□□□□ -1.61
Col18a1P39061 AC124729.1-201ENSMUST00000225327 976 ntBASIC4.98□□□□□ -1.61
Col18a1P39061 CT025689.4-201ENSMUST00000225926 601 ntBASIC4.98□□□□□ -1.61
Col18a1P39061 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col18a1P39061 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Col18a1P39061 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.98□□□□□ -1.61
Col18a1P39061 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
Col18a1P39061 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col18a1P39061 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col18a1P39061 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col18a1P39061 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col18a1P39061 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.97□□□□□ -1.61
Col18a1P39061 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col18a1P39061 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC4.97□□□□□ -1.61
Col18a1P39061 Gm43319-201ENSMUST00000198036 2270 ntBASIC4.97□□□□□ -1.61
Col18a1P39061 Gm5362-201ENSMUST00000211968 3085 ntBASIC4.97□□□□□ -1.61
Col18a1P39061 Gm22750-201ENSMUST00000102076 103 ntBASIC4.97□□□□□ -1.61
Col18a1P39061 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC4.97□□□□□ -1.61
Col18a1P39061 Gm14292-201ENSMUST00000118761 456 ntBASIC4.97□□□□□ -1.61
Col18a1P39061 Gm23016-201ENSMUST00000158431 62 ntBASIC4.97□□□□□ -1.61
Col18a1P39061 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.97□□□□□ -1.61
Col18a1P39061 Gm20660-201ENSMUST00000177515 289 ntBASIC4.97□□□□□ -1.61
Col18a1P39061 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col18a1P39061 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC4.97□□□□□ -1.61
Col18a1P39061 Gm44320-201ENSMUST00000199276 86 ntBASIC4.97□□□□□ -1.61
Col18a1P39061 Gm43155-201ENSMUST00000202661 494 ntBASIC4.97□□□□□ -1.61
Col18a1P39061 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC4.97□□□□□ -1.61
Col18a1P39061 AC158606.1-201ENSMUST00000220078 325 ntBASIC4.97□□□□□ -1.61
Col18a1P39061 AC154636.2-201ENSMUST00000222538 161 ntBASIC4.97□□□□□ -1.61
Col18a1P39061 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.97□□□□□ -1.61
Col18a1P39061 AC107757.3-201ENSMUST00000226312 535 ntBASIC4.97□□□□□ -1.61
Col18a1P39061 Gm25812-201ENSMUST00000082751 103 ntBASIC4.97□□□□□ -1.61
Col18a1P39061 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col18a1P39061 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col18a1P39061 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col18a1P39061 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col18a1P39061 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.97□□□□□ -1.61
Col18a1P39061 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Col18a1P39061 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC4.97□□□□□ -1.61
Col18a1P39061 Gm45577-201ENSMUST00000210206 2287 ntBASIC4.97□□□□□ -1.61
Col18a1P39061 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col18a1P39061 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col18a1P39061 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col18a1P39061 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col18a1P39061 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC4.97□□□□□ -1.61
Col18a1P39061 Gm14774-201ENSMUST00000117857 536 ntBASIC4.96□□□□□ -1.61
Col18a1P39061 Gm15387-201ENSMUST00000120421 648 ntBASIC4.96□□□□□ -1.61
Col18a1P39061 Gm12042-201ENSMUST00000120479 301 ntBASIC4.96□□□□□ -1.61
Col18a1P39061 Gm26476-201ENSMUST00000122618 313 ntBASIC4.96□□□□□ -1.61
Col18a1P39061 Igkv13-64-201ENSMUST00000198143 343 ntBASIC4.96□□□□□ -1.61
Col18a1P39061 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC4.96□□□□□ -1.61
Col18a1P39061 Gm42758-201ENSMUST00000202146 283 ntBASIC4.96□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 167.1 ms