Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC5.03□□□□□ -1.6
Col18a1P39061 Gm43932-201ENSMUST00000204499 52 ntBASIC5.03□□□□□ -1.6
Col18a1P39061 Gm2676-201ENSMUST00000207279 606 ntBASIC5.03□□□□□ -1.6
Col18a1P39061 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC5.03□□□□□ -1.6
Col18a1P39061 AC117656.3-202ENSMUST00000225842 1055 ntBASIC5.03□□□□□ -1.6
Col18a1P39061 AC151833.1-201ENSMUST00000227752 574 ntBASIC5.03□□□□□ -1.6
Col18a1P39061 AC123860.1-201ENSMUST00000228033 481 ntBASIC5.03□□□□□ -1.6
Col18a1P39061 AC139350.4-201ENSMUST00000228483 798 ntBASIC5.03□□□□□ -1.6
Col18a1P39061 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col18a1P39061 Gm25929-201ENSMUST00000082784 107 ntBASIC5.03□□□□□ -1.6
Col18a1P39061 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.03□□□□□ -1.6
Col18a1P39061 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col18a1P39061 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col18a1P39061 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col18a1P39061 Gm42549-201ENSMUST00000202392 7004 ntBASIC5.02□□□□□ -1.61
Col18a1P39061 Gm13961-201ENSMUST00000119282 4772 ntBASIC5.02□□□□□ -1.61
Col18a1P39061 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Col18a1P39061 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Col18a1P39061 Gm22563-201ENSMUST00000157333 269 ntBASIC5.02□□□□□ -1.61
Col18a1P39061 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col18a1P39061 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC5.02□□□□□ -1.61
Col18a1P39061 Gm28149-201ENSMUST00000187102 378 ntBASIC5.02□□□□□ -1.61
Col18a1P39061 Gm28768-201ENSMUST00000189034 378 ntBASIC5.02□□□□□ -1.61
Col18a1P39061 Gm28744-201ENSMUST00000189939 340 ntBASIC5.02□□□□□ -1.61
Col18a1P39061 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC5.02□□□□□ -1.61
Col18a1P39061 Gm43070-201ENSMUST00000196938 415 ntBASIC5.02□□□□□ -1.61
Col18a1P39061 Mir7118-201ENSMUST00000197760 61 ntBASIC5.02□□□□□ -1.61
Col18a1P39061 Gm45157-201ENSMUST00000208729 401 ntBASIC5.02□□□□□ -1.61
Col18a1P39061 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC5.02□□□□□ -1.61
Col18a1P39061 Gm45402-201ENSMUST00000211796 223 ntBASIC5.02□□□□□ -1.61
Col18a1P39061 Gm45735-201ENSMUST00000212779 319 ntBASIC5.02□□□□□ -1.61
Col18a1P39061 AC173482.5-201ENSMUST00000224181 327 ntBASIC5.02□□□□□ -1.61
Col18a1P39061 Gm4987-201ENSMUST00000078326 408 ntBASIC5.02□□□□□ -1.61
Col18a1P39061 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
Col18a1P39061 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Col18a1P39061 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col18a1P39061 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Col18a1P39061 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.01□□□□□ -1.61
Col18a1P39061 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC5.01□□□□□ -1.61
Col18a1P39061 Gm14838-201ENSMUST00000118913 248 ntBASIC5.01□□□□□ -1.61
Col18a1P39061 Gm12156-201ENSMUST00000119188 554 ntBASIC5.01□□□□□ -1.61
Col18a1P39061 Gm11438-201ENSMUST00000121582 189 ntBASIC5.01□□□□□ -1.61
Col18a1P39061 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC5.01□□□□□ -1.61
Col18a1P39061 Gm26100-201ENSMUST00000157245 127 ntBASIC5.01□□□□□ -1.61
Col18a1P39061 Gm22136-201ENSMUST00000158751 268 ntBASIC5.01□□□□□ -1.61
Col18a1P39061 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col18a1P39061 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col18a1P39061 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col18a1P39061 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col18a1P39061 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col18a1P39061 Gm37085-201ENSMUST00000193780 196 ntBASIC5.01□□□□□ -1.61
Col18a1P39061 Mir3535-201ENSMUST00000197651 147 ntBASIC5.01□□□□□ -1.61
Col18a1P39061 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC5.01□□□□□ -1.61
Col18a1P39061 Gm44011-201ENSMUST00000203336 394 ntBASIC5.01□□□□□ -1.61
Col18a1P39061 Gm8106-201ENSMUST00000213123 523 ntBASIC5.01□□□□□ -1.61
Col18a1P39061 Gm10092-201ENSMUST00000077110 180 ntBASIC5.01□□□□□ -1.61
Col18a1P39061 Gm25699-201ENSMUST00000082896 167 ntBASIC5.01□□□□□ -1.61
Col18a1P39061 n-R5s79-201ENSMUST00000083071 120 ntBASIC5.01□□□□□ -1.61
Col18a1P39061 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Col18a1P39061 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC5.01□□□□□ -1.61
Col18a1P39061 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC5.01□□□□□ -1.61
Col18a1P39061 Gm10033-201ENSMUST00000072427 1813 ntBASIC5.01□□□□□ -1.61
Col18a1P39061 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
Col18a1P39061 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col18a1P39061 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col18a1P39061 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col18a1P39061 Gm22019-201ENSMUST00000104359 96 ntBASIC5.01□□□□□ -1.61
Col18a1P39061 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Col18a1P39061 Gm9157-201ENSMUST00000117673 225 ntBASIC5.01□□□□□ -1.61
Col18a1P39061 Gm13082-201ENSMUST00000118877 561 ntBASIC5.01□□□□□ -1.61
Col18a1P39061 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC5.01□□□□□ -1.61
Col18a1P39061 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col18a1P39061 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col18a1P39061 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC5.01□□□□□ -1.61
Col18a1P39061 AC154552.1-201ENSMUST00000222969 202 ntBASIC5.01□□□□□ -1.61
Col18a1P39061 Gm22572-201ENSMUST00000082985 105 ntBASIC5.01□□□□□ -1.61
Col18a1P39061 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC5.01□□□□□ -1.61
Col18a1P39061 Gm43009-201ENSMUST00000199979 3566 ntBASIC5.01□□□□□ -1.61
Col18a1P39061 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC5□□□□□ -1.61
Col18a1P39061 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Col18a1P39061 Gm45555-201ENSMUST00000210028 2602 ntBASIC5□□□□□ -1.61
Col18a1P39061 Gm42967-201ENSMUST00000198647 2312 ntBASIC5□□□□□ -1.61
Col18a1P39061 Gm42552-201ENSMUST00000196754 4497 ntBASIC5□□□□□ -1.61
Col18a1P39061 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col18a1P39061 Gm42870-201ENSMUST00000199355 3470 ntBASIC5□□□□□ -1.61
Col18a1P39061 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col18a1P39061 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC5□□□□□ -1.61
Col18a1P39061 Gm29062-201ENSMUST00000186032 694 ntBASIC5□□□□□ -1.61
Col18a1P39061 Gm28255-201ENSMUST00000187101 694 ntBASIC5□□□□□ -1.61
Col18a1P39061 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC5□□□□□ -1.61
Col18a1P39061 Gm5649-201ENSMUST00000217918 951 ntBASIC5□□□□□ -1.61
Col18a1P39061 AC153924.1-201ENSMUST00000220117 312 ntBASIC5□□□□□ -1.61
Col18a1P39061 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col18a1P39061 Gm24148-201ENSMUST00000082762 80 ntBASIC5□□□□□ -1.61
Col18a1P39061 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col18a1P39061 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Col18a1P39061 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5□□□□□ -1.61
Col18a1P39061 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
Col18a1P39061 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col18a1P39061 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 150.4 ms