Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pfdn6Q03958 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pfdn6Q03958 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pfdn6Q03958 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pfdn6Q03958 Gm12527-201ENSMUST00000117967 564 ntBASIC17.29■□□□□ 0.36
Pfdn6Q03958 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.29■□□□□ 0.36
Pfdn6Q03958 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Pfdn6Q03958 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pfdn6Q03958 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pfdn6Q03958 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pfdn6Q03958 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pfdn6Q03958 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pfdn6Q03958 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.29■□□□□ 0.36
Pfdn6Q03958 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pfdn6Q03958 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pfdn6Q03958 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.28■□□□□ 0.36
Pfdn6Q03958 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.28■□□□□ 0.36
Pfdn6Q03958 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pfdn6Q03958 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pfdn6Q03958 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pfdn6Q03958 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pfdn6Q03958 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pfdn6Q03958 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pfdn6Q03958 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pfdn6Q03958 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.28■□□□□ 0.36
Pfdn6Q03958 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.28■□□□□ 0.36
Pfdn6Q03958 Gm15378-201ENSMUST00000121894 207 ntBASIC17.28■□□□□ 0.36
Pfdn6Q03958 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pfdn6Q03958 Gm42545-201ENSMUST00000202755 922 ntBASIC17.28■□□□□ 0.36
Pfdn6Q03958 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.28■□□□□ 0.36
Pfdn6Q03958 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pfdn6Q03958 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pfdn6Q03958 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pfdn6Q03958 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pfdn6Q03958 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pfdn6Q03958 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pfdn6Q03958 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.27■□□□□ 0.36
Pfdn6Q03958 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pfdn6Q03958 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pfdn6Q03958 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pfdn6Q03958 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pfdn6Q03958 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.27■□□□□ 0.36
Pfdn6Q03958 Gm20760-201ENSMUST00000179197 648 ntBASIC17.27■□□□□ 0.36
Pfdn6Q03958 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pfdn6Q03958 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.35
Pfdn6Q03958 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pfdn6Q03958 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pfdn6Q03958 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pfdn6Q03958 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pfdn6Q03958 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pfdn6Q03958 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pfdn6Q03958 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Pfdn6Q03958 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pfdn6Q03958 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pfdn6Q03958 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pfdn6Q03958 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pfdn6Q03958 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Pfdn6Q03958 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.26■□□□□ 0.35
Pfdn6Q03958 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.26■□□□□ 0.35
Pfdn6Q03958 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.26■□□□□ 0.35
Pfdn6Q03958 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.26■□□□□ 0.35
Pfdn6Q03958 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pfdn6Q03958 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pfdn6Q03958 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Pfdn6Q03958 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pfdn6Q03958 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pfdn6Q03958 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pfdn6Q03958 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pfdn6Q03958 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pfdn6Q03958 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pfdn6Q03958 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pfdn6Q03958 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.26■□□□□ 0.35
Pfdn6Q03958 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pfdn6Q03958 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pfdn6Q03958 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pfdn6Q03958 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pfdn6Q03958 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pfdn6Q03958 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pfdn6Q03958 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.25■□□□□ 0.35
Pfdn6Q03958 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pfdn6Q03958 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pfdn6Q03958 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pfdn6Q03958 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Pfdn6Q03958 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.25■□□□□ 0.35
Pfdn6Q03958 Gm29257-201ENSMUST00000186115 639 ntBASIC17.25■□□□□ 0.35
Pfdn6Q03958 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.25■□□□□ 0.35
Pfdn6Q03958 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Pfdn6Q03958 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Pfdn6Q03958 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pfdn6Q03958 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pfdn6Q03958 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pfdn6Q03958 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.25■□□□□ 0.35
Pfdn6Q03958 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pfdn6Q03958 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pfdn6Q03958 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pfdn6Q03958 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.24■□□□□ 0.35
Pfdn6Q03958 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pfdn6Q03958 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pfdn6Q03958 Gm5643-201ENSMUST00000117081 966 ntBASIC17.24■□□□□ 0.35
Pfdn6Q03958 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms