Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
4933424G06RikA0A140LIP3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.6■□□□□ 0.41
4933424G06RikA0A140LIP3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
4933424G06RikA0A140LIP3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
4933424G06RikA0A140LIP3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
4933424G06RikA0A140LIP3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
4933424G06RikA0A140LIP3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
4933424G06RikA0A140LIP3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
4933424G06RikA0A140LIP3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
4933424G06RikA0A140LIP3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
4933424G06RikA0A140LIP3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.59■□□□□ 0.41
4933424G06RikA0A140LIP3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
4933424G06RikA0A140LIP3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.59■□□□□ 0.41
4933424G06RikA0A140LIP3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
4933424G06RikA0A140LIP3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
4933424G06RikA0A140LIP3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
4933424G06RikA0A140LIP3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
4933424G06RikA0A140LIP3 Gm17661-201ENSMUST00000170317 270 ntBASIC17.59■□□□□ 0.41
4933424G06RikA0A140LIP3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.59■□□□□ 0.41
4933424G06RikA0A140LIP3 Gm21362-201ENSMUST00000194272 928 ntBASIC17.59■□□□□ 0.41
4933424G06RikA0A140LIP3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
4933424G06RikA0A140LIP3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
4933424G06RikA0A140LIP3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
4933424G06RikA0A140LIP3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
4933424G06RikA0A140LIP3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
4933424G06RikA0A140LIP3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
4933424G06RikA0A140LIP3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
4933424G06RikA0A140LIP3 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.59■□□□□ 0.41
4933424G06RikA0A140LIP3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
4933424G06RikA0A140LIP3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
4933424G06RikA0A140LIP3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
4933424G06RikA0A140LIP3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
4933424G06RikA0A140LIP3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
4933424G06RikA0A140LIP3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
4933424G06RikA0A140LIP3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
4933424G06RikA0A140LIP3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
4933424G06RikA0A140LIP3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
4933424G06RikA0A140LIP3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.58■□□□□ 0.4
4933424G06RikA0A140LIP3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
4933424G06RikA0A140LIP3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
4933424G06RikA0A140LIP3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
4933424G06RikA0A140LIP3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
4933424G06RikA0A140LIP3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
4933424G06RikA0A140LIP3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
4933424G06RikA0A140LIP3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
4933424G06RikA0A140LIP3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
4933424G06RikA0A140LIP3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
4933424G06RikA0A140LIP3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
4933424G06RikA0A140LIP3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
4933424G06RikA0A140LIP3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
4933424G06RikA0A140LIP3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
4933424G06RikA0A140LIP3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
4933424G06RikA0A140LIP3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
4933424G06RikA0A140LIP3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
4933424G06RikA0A140LIP3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
4933424G06RikA0A140LIP3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
4933424G06RikA0A140LIP3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
4933424G06RikA0A140LIP3 Gm27389-201ENSMUST00000183622 195 ntBASIC17.57■□□□□ 0.4
4933424G06RikA0A140LIP3 Mir8112-201ENSMUST00000184382 131 ntBASIC17.57■□□□□ 0.4
4933424G06RikA0A140LIP3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
4933424G06RikA0A140LIP3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
4933424G06RikA0A140LIP3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
4933424G06RikA0A140LIP3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.57■□□□□ 0.4
4933424G06RikA0A140LIP3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
4933424G06RikA0A140LIP3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
4933424G06RikA0A140LIP3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.56■□□□□ 0.4
4933424G06RikA0A140LIP3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
4933424G06RikA0A140LIP3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
4933424G06RikA0A140LIP3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
4933424G06RikA0A140LIP3 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.56■□□□□ 0.4
4933424G06RikA0A140LIP3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
4933424G06RikA0A140LIP3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
4933424G06RikA0A140LIP3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.56■□□□□ 0.4
4933424G06RikA0A140LIP3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
4933424G06RikA0A140LIP3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
4933424G06RikA0A140LIP3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.56■□□□□ 0.4
4933424G06RikA0A140LIP3 Gm6345-202ENSMUST00000180900 204 ntBASIC17.56■□□□□ 0.4
4933424G06RikA0A140LIP3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
4933424G06RikA0A140LIP3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
4933424G06RikA0A140LIP3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
4933424G06RikA0A140LIP3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
4933424G06RikA0A140LIP3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
4933424G06RikA0A140LIP3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
4933424G06RikA0A140LIP3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
4933424G06RikA0A140LIP3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
4933424G06RikA0A140LIP3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.55■□□□□ 0.4
4933424G06RikA0A140LIP3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
4933424G06RikA0A140LIP3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
4933424G06RikA0A140LIP3 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.55■□□□□ 0.4
4933424G06RikA0A140LIP3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
4933424G06RikA0A140LIP3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
4933424G06RikA0A140LIP3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.55■□□□□ 0.4
4933424G06RikA0A140LIP3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.55■□□□□ 0.4
4933424G06RikA0A140LIP3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
4933424G06RikA0A140LIP3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
4933424G06RikA0A140LIP3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.55■□□□□ 0.4
4933424G06RikA0A140LIP3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
4933424G06RikA0A140LIP3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.55■□□□□ 0.4
4933424G06RikA0A140LIP3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
4933424G06RikA0A140LIP3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms