Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cstf1Q99LC2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Cstf1Q99LC2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Cstf1Q99LC2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cstf1Q99LC2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cstf1Q99LC2 Particl-201ENSMUST00000205370 1560 ntBASIC24.09■■□□□ 1.45
Cstf1Q99LC2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cstf1Q99LC2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cstf1Q99LC2 Scarna2-201ENSMUST00000157560 414 ntBASIC24.09■■□□□ 1.45
Cstf1Q99LC2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Cstf1Q99LC2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Cstf1Q99LC2 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.08■■□□□ 1.44
Cstf1Q99LC2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Cstf1Q99LC2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cstf1Q99LC2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.07■■□□□ 1.44
Cstf1Q99LC2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.05■■□□□ 1.44
Cstf1Q99LC2 Gm11687-201ENSMUST00000118911 886 ntBASIC24.05■■□□□ 1.44
Cstf1Q99LC2 Gm12366-201ENSMUST00000121722 873 ntBASIC24.05■■□□□ 1.44
Cstf1Q99LC2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.05■■□□□ 1.44
Cstf1Q99LC2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.05■■□□□ 1.44
Cstf1Q99LC2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cstf1Q99LC2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Cstf1Q99LC2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cstf1Q99LC2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.05■■□□□ 1.44
Cstf1Q99LC2 Gm5786-201ENSMUST00000085368 882 ntBASIC24.05■■□□□ 1.44
Cstf1Q99LC2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cstf1Q99LC2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Cstf1Q99LC2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.04■■□□□ 1.44
Cstf1Q99LC2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cstf1Q99LC2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Cstf1Q99LC2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.03■■□□□ 1.44
Cstf1Q99LC2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Cstf1Q99LC2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cstf1Q99LC2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cstf1Q99LC2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Cstf1Q99LC2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Cstf1Q99LC2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Cstf1Q99LC2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24■■□□□ 1.43
Cstf1Q99LC2 Gm9806-201ENSMUST00000051080 552 ntBASIC24■■□□□ 1.43
Cstf1Q99LC2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cstf1Q99LC2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Cstf1Q99LC2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Cstf1Q99LC2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cstf1Q99LC2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cstf1Q99LC2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cstf1Q99LC2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
Cstf1Q99LC2 Gm16437-201ENSMUST00000025669 507 ntBASIC23.96■■□□□ 1.43
Cstf1Q99LC2 Gm4799-201ENSMUST00000095396 657 ntBASIC23.96■■□□□ 1.43
Cstf1Q99LC2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cstf1Q99LC2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.95■■□□□ 1.42
Cstf1Q99LC2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Cstf1Q99LC2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Cstf1Q99LC2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Cstf1Q99LC2 Gm30023-201ENSMUST00000197970 889 ntBASIC23.94■■□□□ 1.42
Cstf1Q99LC2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Cstf1Q99LC2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cstf1Q99LC2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cstf1Q99LC2 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.92■■□□□ 1.42
Cstf1Q99LC2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cstf1Q99LC2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Cstf1Q99LC2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cstf1Q99LC2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cstf1Q99LC2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Cstf1Q99LC2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cstf1Q99LC2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cstf1Q99LC2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Cstf1Q99LC2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cstf1Q99LC2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Cstf1Q99LC2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cstf1Q99LC2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
Cstf1Q99LC2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.86■■□□□ 1.41
Cstf1Q99LC2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cstf1Q99LC2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
Cstf1Q99LC2 Gm7332-201ENSMUST00000118351 454 ntBASIC23.85■■□□□ 1.41
Cstf1Q99LC2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.85■■□□□ 1.41
Cstf1Q99LC2 Gm15039-201ENSMUST00000118914 875 ntBASIC23.84■■□□□ 1.41
Cstf1Q99LC2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.84■■□□□ 1.41
Cstf1Q99LC2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cstf1Q99LC2 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.83■■□□□ 1.41
Cstf1Q99LC2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cstf1Q99LC2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.82■■□□□ 1.4
Cstf1Q99LC2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.82■■□□□ 1.4
Cstf1Q99LC2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cstf1Q99LC2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Cstf1Q99LC2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cstf1Q99LC2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Cstf1Q99LC2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Cstf1Q99LC2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.8■■□□□ 1.4
Cstf1Q99LC2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cstf1Q99LC2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Cstf1Q99LC2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cstf1Q99LC2 Gm27502-201ENSMUST00000183495 199 ntBASIC23.78■■□□□ 1.4
Cstf1Q99LC2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cstf1Q99LC2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cstf1Q99LC2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cstf1Q99LC2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cstf1Q99LC2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cstf1Q99LC2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cstf1Q99LC2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.77■■□□□ 1.4
Cstf1Q99LC2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms