Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm14523-201ENSMUST00000117260 558 ntBASIC20.95■□□□□ 0.94
Rif1Q6PR54 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.95■□□□□ 0.94
Rif1Q6PR54 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rif1Q6PR54 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.94■□□□□ 0.94
Rif1Q6PR54 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rif1Q6PR54 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.94■□□□□ 0.94
Rif1Q6PR54 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Rif1Q6PR54 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Rif1Q6PR54 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.93■□□□□ 0.94
Rif1Q6PR54 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rif1Q6PR54 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Rif1Q6PR54 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Rif1Q6PR54 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rif1Q6PR54 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rif1Q6PR54 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rif1Q6PR54 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rif1Q6PR54 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rif1Q6PR54 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.9■□□□□ 0.94
Rif1Q6PR54 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.89■□□□□ 0.93
Rif1Q6PR54 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rif1Q6PR54 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rif1Q6PR54 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Rif1Q6PR54 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rif1Q6PR54 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.87■□□□□ 0.93
Rif1Q6PR54 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Rif1Q6PR54 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.86■□□□□ 0.93
Rif1Q6PR54 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rif1Q6PR54 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.86■□□□□ 0.93
Rif1Q6PR54 Gm45102-201ENSMUST00000207427 857 ntBASIC20.86■□□□□ 0.93
Rif1Q6PR54 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Rif1Q6PR54 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.85■□□□□ 0.93
Rif1Q6PR54 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Rif1Q6PR54 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.84■□□□□ 0.93
Rif1Q6PR54 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rif1Q6PR54 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.84■□□□□ 0.93
Rif1Q6PR54 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rif1Q6PR54 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.84■□□□□ 0.93
Rif1Q6PR54 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rif1Q6PR54 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rif1Q6PR54 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rif1Q6PR54 Gm10420-201ENSMUST00000121713 882 ntBASIC20.83■□□□□ 0.92
Rif1Q6PR54 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rif1Q6PR54 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rif1Q6PR54 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rif1Q6PR54 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rif1Q6PR54 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rif1Q6PR54 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Rif1Q6PR54 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rif1Q6PR54 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Rif1Q6PR54 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rif1Q6PR54 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rif1Q6PR54 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Rif1Q6PR54 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rif1Q6PR54 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.76■□□□□ 0.91
Rif1Q6PR54 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rif1Q6PR54 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rif1Q6PR54 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.76■□□□□ 0.91
Rif1Q6PR54 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rif1Q6PR54 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rif1Q6PR54 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rif1Q6PR54 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rif1Q6PR54 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.74■□□□□ 0.91
Rif1Q6PR54 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rif1Q6PR54 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rif1Q6PR54 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rif1Q6PR54 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rif1Q6PR54 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rif1Q6PR54 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rif1Q6PR54 Gm27502-201ENSMUST00000183495 199 ntBASIC20.72■□□□□ 0.91
Rif1Q6PR54 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rif1Q6PR54 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rif1Q6PR54 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Rif1Q6PR54 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Rif1Q6PR54 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rif1Q6PR54 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rif1Q6PR54 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.69■□□□□ 0.9
Rif1Q6PR54 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Rif1Q6PR54 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rif1Q6PR54 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rif1Q6PR54 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.68■□□□□ 0.9
Rif1Q6PR54 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rif1Q6PR54 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rif1Q6PR54 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rif1Q6PR54 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.68■□□□□ 0.9
Rif1Q6PR54 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rif1Q6PR54 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.67■□□□□ 0.9
Rif1Q6PR54 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rif1Q6PR54 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rif1Q6PR54 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rif1Q6PR54 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rif1Q6PR54 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Rif1Q6PR54 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rif1Q6PR54 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rif1Q6PR54 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rif1Q6PR54 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rif1Q6PR54 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.65■□□□□ 0.9
Rif1Q6PR54 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rif1Q6PR54 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rif1Q6PR54 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rif1Q6PR54 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms