Protein–RNA interactions for Protein: Q6PDM4

Ccdc36, Interactor of HORMAD1 protein 1, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc36Q6PDM4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc36Q6PDM4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Ccdc36Q6PDM4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc36Q6PDM4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ccdc36Q6PDM4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc36Q6PDM4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc36Q6PDM4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc36Q6PDM4 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc36Q6PDM4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc36Q6PDM4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc36Q6PDM4 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.05■□□□□ 0.8
Ccdc36Q6PDM4 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Ccdc36Q6PDM4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc36Q6PDM4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc36Q6PDM4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc36Q6PDM4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Ccdc36Q6PDM4 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc36Q6PDM4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc36Q6PDM4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc36Q6PDM4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc36Q6PDM4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc36Q6PDM4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc36Q6PDM4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc36Q6PDM4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc36Q6PDM4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc36Q6PDM4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.02■□□□□ 0.8
Ccdc36Q6PDM4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.02■□□□□ 0.79
Ccdc36Q6PDM4 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.79
Ccdc36Q6PDM4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc36Q6PDM4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.01■□□□□ 0.79
Ccdc36Q6PDM4 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.01■□□□□ 0.79
Ccdc36Q6PDM4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc36Q6PDM4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc36Q6PDM4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Ccdc36Q6PDM4 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.99■□□□□ 0.79
Ccdc36Q6PDM4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc36Q6PDM4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc36Q6PDM4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc36Q6PDM4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc36Q6PDM4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc36Q6PDM4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc36Q6PDM4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc36Q6PDM4 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.97■□□□□ 0.79
Ccdc36Q6PDM4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.96■□□□□ 0.79
Ccdc36Q6PDM4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc36Q6PDM4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc36Q6PDM4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.96■□□□□ 0.79
Ccdc36Q6PDM4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc36Q6PDM4 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc36Q6PDM4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc36Q6PDM4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc36Q6PDM4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc36Q6PDM4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc36Q6PDM4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc36Q6PDM4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc36Q6PDM4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc36Q6PDM4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc36Q6PDM4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc36Q6PDM4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc36Q6PDM4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc36Q6PDM4 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.9■□□□□ 0.78
Ccdc36Q6PDM4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc36Q6PDM4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Ccdc36Q6PDM4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc36Q6PDM4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc36Q6PDM4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc36Q6PDM4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.88■□□□□ 0.77
Ccdc36Q6PDM4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Ccdc36Q6PDM4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc36Q6PDM4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc36Q6PDM4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc36Q6PDM4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc36Q6PDM4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc36Q6PDM4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc36Q6PDM4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc36Q6PDM4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ccdc36Q6PDM4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Ccdc36Q6PDM4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc36Q6PDM4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc36Q6PDM4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc36Q6PDM4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc36Q6PDM4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ccdc36Q6PDM4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc36Q6PDM4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.85■□□□□ 0.77
Ccdc36Q6PDM4 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.84■□□□□ 0.77
Ccdc36Q6PDM4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Ccdc36Q6PDM4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc36Q6PDM4 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Ccdc36Q6PDM4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Ccdc36Q6PDM4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Ccdc36Q6PDM4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc36Q6PDM4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.82■□□□□ 0.76
Ccdc36Q6PDM4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc36Q6PDM4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc36Q6PDM4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ccdc36Q6PDM4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc36Q6PDM4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc36Q6PDM4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc36Q6PDM4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc36Q6PDM4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms