Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Foxn1Q61575 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Foxn1Q61575 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Foxn1Q61575 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
Foxn1Q61575 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Foxn1Q61575 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Foxn1Q61575 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Foxn1Q61575 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Foxn1Q61575 Gm7332-201ENSMUST00000118351 454 ntBASIC28.18■■■□□ 2.1
Foxn1Q61575 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Foxn1Q61575 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Foxn1Q61575 Particl-201ENSMUST00000205370 1560 ntBASIC28.18■■■□□ 2.1
Foxn1Q61575 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Foxn1Q61575 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Foxn1Q61575 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Foxn1Q61575 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC28.16■■■□□ 2.1
Foxn1Q61575 Gm16437-201ENSMUST00000025669 507 ntBASIC28.16■■■□□ 2.1
Foxn1Q61575 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Foxn1Q61575 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Foxn1Q61575 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC28.14■■■□□ 2.1
Foxn1Q61575 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
Foxn1Q61575 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Foxn1Q61575 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Foxn1Q61575 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Foxn1Q61575 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Foxn1Q61575 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Foxn1Q61575 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Foxn1Q61575 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Foxn1Q61575 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC28.09■■■□□ 2.09
Foxn1Q61575 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Foxn1Q61575 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Foxn1Q61575 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Foxn1Q61575 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
Foxn1Q61575 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC28.07■■■□□ 2.08
Foxn1Q61575 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Foxn1Q61575 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Foxn1Q61575 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Foxn1Q61575 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC28.06■■■□□ 2.08
Foxn1Q61575 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Foxn1Q61575 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC28.05■■■□□ 2.08
Foxn1Q61575 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Foxn1Q61575 Gm27502-201ENSMUST00000183495 199 ntBASIC28.04■■■□□ 2.08
Foxn1Q61575 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Foxn1Q61575 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Foxn1Q61575 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC28.03■■■□□ 2.08
Foxn1Q61575 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Foxn1Q61575 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC28.03■■■□□ 2.08
Foxn1Q61575 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC28.03■■■□□ 2.08
Foxn1Q61575 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Foxn1Q61575 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Foxn1Q61575 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC28.01■■■□□ 2.07
Foxn1Q61575 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Foxn1Q61575 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28■■■□□ 2.07
Foxn1Q61575 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28■■■□□ 2.07
Foxn1Q61575 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC28■■■□□ 2.07
Foxn1Q61575 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC27.99■■■□□ 2.07
Foxn1Q61575 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC27.99■■■□□ 2.07
Foxn1Q61575 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Foxn1Q61575 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
Foxn1Q61575 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Foxn1Q61575 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
Foxn1Q61575 Gm5812-201ENSMUST00000061073 957 ntBASIC27.98■■■□□ 2.07
Foxn1Q61575 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Foxn1Q61575 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Foxn1Q61575 Pkd1-207ENSMUST00000228550 1050 ntBASIC27.97■■■□□ 2.07
Foxn1Q61575 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC27.96■■■□□ 2.07
Foxn1Q61575 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Foxn1Q61575 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC27.94■■■□□ 2.06
Foxn1Q61575 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Foxn1Q61575 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Foxn1Q61575 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Foxn1Q61575 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC27.92■■■□□ 2.06
Foxn1Q61575 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Foxn1Q61575 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
Foxn1Q61575 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Foxn1Q61575 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Foxn1Q61575 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
Foxn1Q61575 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Foxn1Q61575 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Foxn1Q61575 AC154454.1-201ENSMUST00000225253 216 ntBASIC27.86■■■□□ 2.05
Foxn1Q61575 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Foxn1Q61575 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Foxn1Q61575 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Foxn1Q61575 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
Foxn1Q61575 Gm30023-201ENSMUST00000197970 889 ntBASIC27.84■■■□□ 2.05
Foxn1Q61575 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Foxn1Q61575 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Foxn1Q61575 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Foxn1Q61575 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Foxn1Q61575 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Foxn1Q61575 Gm14523-201ENSMUST00000117260 558 ntBASIC27.81■■■□□ 2.04
Foxn1Q61575 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC27.79■■■□□ 2.04
Foxn1Q61575 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Foxn1Q61575 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC27.78■■■□□ 2.04
Foxn1Q61575 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Foxn1Q61575 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Foxn1Q61575 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC27.77■■■□□ 2.04
Foxn1Q61575 Gm5067-201ENSMUST00000170449 1009 ntBASIC27.76■■■□□ 2.03
Foxn1Q61575 Mir3960-201ENSMUST00000198213 73 ntBASIC27.76■■■□□ 2.03
Foxn1Q61575 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms