Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Zic4Q61467 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Zic4Q61467 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Zic4Q61467 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Zic4Q61467 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Zic4Q61467 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Zic4Q61467 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Zic4Q61467 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Zic4Q61467 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Zic4Q61467 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Zic4Q61467 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Zic4Q61467 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Zic4Q61467 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Zic4Q61467 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Zic4Q61467 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Zic4Q61467 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Zic4Q61467 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Zic4Q61467 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Zic4Q61467 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Zic4Q61467 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Zic4Q61467 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Zic4Q61467 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Zic4Q61467 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Zic4Q61467 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Zic4Q61467 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Zic4Q61467 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Zic4Q61467 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Zic4Q61467 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Zic4Q61467 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Zic4Q61467 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.42■□□□□ 0.7
Zic4Q61467 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zic4Q61467 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Zic4Q61467 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Zic4Q61467 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Zic4Q61467 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zic4Q61467 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Zic4Q61467 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Zic4Q61467 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zic4Q61467 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Zic4Q61467 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Zic4Q61467 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Zic4Q61467 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Zic4Q61467 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Zic4Q61467 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Zic4Q61467 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Zic4Q61467 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Zic4Q61467 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Zic4Q61467 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Zic4Q61467 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.37■□□□□ 0.69
Zic4Q61467 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Zic4Q61467 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Zic4Q61467 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Zic4Q61467 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Zic4Q61467 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Zic4Q61467 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Zic4Q61467 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Zic4Q61467 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Zic4Q61467 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Zic4Q61467 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Zic4Q61467 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Zic4Q61467 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Zic4Q61467 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Zic4Q61467 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.32■□□□□ 0.68
Zic4Q61467 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Zic4Q61467 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Zic4Q61467 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Zic4Q61467 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Zic4Q61467 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Zic4Q61467 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Zic4Q61467 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.32■□□□□ 0.68
Zic4Q61467 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Zic4Q61467 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Zic4Q61467 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Zic4Q61467 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zic4Q61467 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zic4Q61467 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zic4Q61467 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zic4Q61467 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zic4Q61467 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zic4Q61467 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zic4Q61467 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Zic4Q61467 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zic4Q61467 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Zic4Q61467 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Zic4Q61467 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Zic4Q61467 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Zic4Q61467 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zic4Q61467 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zic4Q61467 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.25■□□□□ 0.67
Zic4Q61467 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zic4Q61467 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zic4Q61467 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Zic4Q61467 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Zic4Q61467 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Zic4Q61467 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Zic4Q61467 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zic4Q61467 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.24■□□□□ 0.67
Zic4Q61467 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zic4Q61467 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Zic4Q61467 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 160.6 ms