Protein–RNA interactions for Protein: Q571G4

Lin54, Protein lin-54 homolog, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin54Q571G4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lin54Q571G4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lin54Q571G4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lin54Q571G4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lin54Q571G4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lin54Q571G4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lin54Q571G4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lin54Q571G4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lin54Q571G4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Lin54Q571G4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Lin54Q571G4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lin54Q571G4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lin54Q571G4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.43■□□□□ 0.86
Lin54Q571G4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lin54Q571G4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lin54Q571G4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lin54Q571G4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lin54Q571G4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lin54Q571G4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Lin54Q571G4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lin54Q571G4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lin54Q571G4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lin54Q571G4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Lin54Q571G4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lin54Q571G4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lin54Q571G4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Lin54Q571G4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Lin54Q571G4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Lin54Q571G4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.37■□□□□ 0.85
Lin54Q571G4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Lin54Q571G4 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.37■□□□□ 0.85
Lin54Q571G4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lin54Q571G4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
Lin54Q571G4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lin54Q571G4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lin54Q571G4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Lin54Q571G4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lin54Q571G4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lin54Q571G4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lin54Q571G4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lin54Q571G4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lin54Q571G4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Lin54Q571G4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Lin54Q571G4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Lin54Q571G4 Gm8109-201ENSMUST00000194076 746 ntBASIC20.33■□□□□ 0.85
Lin54Q571G4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lin54Q571G4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lin54Q571G4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lin54Q571G4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lin54Q571G4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lin54Q571G4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lin54Q571G4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lin54Q571G4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lin54Q571G4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lin54Q571G4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lin54Q571G4 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lin54Q571G4 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.3■□□□□ 0.84
Lin54Q571G4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lin54Q571G4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lin54Q571G4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.3■□□□□ 0.84
Lin54Q571G4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lin54Q571G4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Lin54Q571G4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Lin54Q571G4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Lin54Q571G4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lin54Q571G4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.29■□□□□ 0.84
Lin54Q571G4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lin54Q571G4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lin54Q571G4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lin54Q571G4 Gm26115-201ENSMUST00000175605 87 ntBASIC20.27■□□□□ 0.84
Lin54Q571G4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lin54Q571G4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lin54Q571G4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lin54Q571G4 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lin54Q571G4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lin54Q571G4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lin54Q571G4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lin54Q571G4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lin54Q571G4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lin54Q571G4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lin54Q571G4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lin54Q571G4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Lin54Q571G4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lin54Q571G4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lin54Q571G4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lin54Q571G4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lin54Q571G4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lin54Q571G4 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lin54Q571G4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lin54Q571G4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lin54Q571G4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Lin54Q571G4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.19■□□□□ 0.82
Lin54Q571G4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Lin54Q571G4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lin54Q571G4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lin54Q571G4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Lin54Q571G4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lin54Q571G4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lin54Q571G4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lin54Q571G4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms