Protein–RNA interactions for Protein: Q3UWR2

Khdc1a, KH homology domain-containing protein 1A, mousemouse

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc1aQ3UWR2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Khdc1aQ3UWR2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Khdc1aQ3UWR2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Khdc1aQ3UWR2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Khdc1aQ3UWR2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Khdc1aQ3UWR2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Khdc1aQ3UWR2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Khdc1aQ3UWR2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Khdc1aQ3UWR2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Khdc1aQ3UWR2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Khdc1aQ3UWR2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Khdc1aQ3UWR2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Khdc1aQ3UWR2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Khdc1aQ3UWR2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdc1aQ3UWR2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdc1aQ3UWR2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdc1aQ3UWR2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Khdc1aQ3UWR2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Khdc1aQ3UWR2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Khdc1aQ3UWR2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Khdc1aQ3UWR2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc1aQ3UWR2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc1aQ3UWR2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17.76■□□□□ 0.43
Khdc1aQ3UWR2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Khdc1aQ3UWR2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Khdc1aQ3UWR2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
Khdc1aQ3UWR2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Khdc1aQ3UWR2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Khdc1aQ3UWR2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Khdc1aQ3UWR2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Khdc1aQ3UWR2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Khdc1aQ3UWR2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Khdc1aQ3UWR2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Khdc1aQ3UWR2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Khdc1aQ3UWR2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Khdc1aQ3UWR2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Khdc1aQ3UWR2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Khdc1aQ3UWR2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Khdc1aQ3UWR2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Khdc1aQ3UWR2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Khdc1aQ3UWR2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Khdc1aQ3UWR2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Khdc1aQ3UWR2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Khdc1aQ3UWR2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
Khdc1aQ3UWR2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Khdc1aQ3UWR2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Khdc1aQ3UWR2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Khdc1aQ3UWR2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Khdc1aQ3UWR2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Khdc1aQ3UWR2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Khdc1aQ3UWR2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Khdc1aQ3UWR2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Khdc1aQ3UWR2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Khdc1aQ3UWR2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Khdc1aQ3UWR2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Khdc1aQ3UWR2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Khdc1aQ3UWR2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.69■□□□□ 0.42
Khdc1aQ3UWR2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Khdc1aQ3UWR2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Khdc1aQ3UWR2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Khdc1aQ3UWR2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Khdc1aQ3UWR2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Khdc1aQ3UWR2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Khdc1aQ3UWR2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Khdc1aQ3UWR2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Khdc1aQ3UWR2 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.66■□□□□ 0.42
Khdc1aQ3UWR2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.66■□□□□ 0.42
Khdc1aQ3UWR2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Khdc1aQ3UWR2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Khdc1aQ3UWR2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Khdc1aQ3UWR2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Khdc1aQ3UWR2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Khdc1aQ3UWR2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Khdc1aQ3UWR2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.64■□□□□ 0.41
Khdc1aQ3UWR2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Khdc1aQ3UWR2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Khdc1aQ3UWR2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Khdc1aQ3UWR2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Khdc1aQ3UWR2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Khdc1aQ3UWR2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Khdc1aQ3UWR2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Khdc1aQ3UWR2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Khdc1aQ3UWR2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Khdc1aQ3UWR2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.62■□□□□ 0.41
Khdc1aQ3UWR2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Khdc1aQ3UWR2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Khdc1aQ3UWR2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Khdc1aQ3UWR2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Khdc1aQ3UWR2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Khdc1aQ3UWR2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Khdc1aQ3UWR2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.61■□□□□ 0.41
Khdc1aQ3UWR2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Khdc1aQ3UWR2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Khdc1aQ3UWR2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Khdc1aQ3UWR2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Khdc1aQ3UWR2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Khdc1aQ3UWR2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Khdc1aQ3UWR2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Khdc1aQ3UWR2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Khdc1aQ3UWR2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms