Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Vars2Q3U2A8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Vars2Q3U2A8 Particl-201ENSMUST00000205370 1560 ntBASIC31.3■■■□□ 2.6
Vars2Q3U2A8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Vars2Q3U2A8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Vars2Q3U2A8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Vars2Q3U2A8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC31.28■■■□□ 2.6
Vars2Q3U2A8 Gm9806-201ENSMUST00000051080 552 ntBASIC31.28■■■□□ 2.6
Vars2Q3U2A8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC31.27■■■□□ 2.6
Vars2Q3U2A8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Vars2Q3U2A8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Vars2Q3U2A8 Gm4799-201ENSMUST00000095396 657 ntBASIC31.27■■■□□ 2.6
Vars2Q3U2A8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Vars2Q3U2A8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Vars2Q3U2A8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Vars2Q3U2A8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Vars2Q3U2A8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Vars2Q3U2A8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC31.2■■■□□ 2.59
Vars2Q3U2A8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC31.2■■■□□ 2.59
Vars2Q3U2A8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
Vars2Q3U2A8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC31.18■■■□□ 2.58
Vars2Q3U2A8 Gm16437-201ENSMUST00000025669 507 ntBASIC31.18■■■□□ 2.58
Vars2Q3U2A8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
Vars2Q3U2A8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Vars2Q3U2A8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC31.18■■■□□ 2.58
Vars2Q3U2A8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
Vars2Q3U2A8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Vars2Q3U2A8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Vars2Q3U2A8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
Vars2Q3U2A8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Vars2Q3U2A8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Vars2Q3U2A8 Gm7332-201ENSMUST00000118351 454 ntBASIC31.14■■■□□ 2.58
Vars2Q3U2A8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Vars2Q3U2A8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
Vars2Q3U2A8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Vars2Q3U2A8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC31.13■■■□□ 2.57
Vars2Q3U2A8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Vars2Q3U2A8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC31.11■■■□□ 2.57
Vars2Q3U2A8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Vars2Q3U2A8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC31.09■■■□□ 2.57
Vars2Q3U2A8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Vars2Q3U2A8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Vars2Q3U2A8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Vars2Q3U2A8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Vars2Q3U2A8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Vars2Q3U2A8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Vars2Q3U2A8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC31.07■■■□□ 2.56
Vars2Q3U2A8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC31.05■■■□□ 2.56
Vars2Q3U2A8 Gm22567-201ENSMUST00000175542 342 ntBASIC31.05■■■□□ 2.56
Vars2Q3U2A8 Gm30023-201ENSMUST00000197970 889 ntBASIC31.05■■■□□ 2.56
Vars2Q3U2A8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Vars2Q3U2A8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Vars2Q3U2A8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Vars2Q3U2A8 Pkd1-207ENSMUST00000228550 1050 ntBASIC31.03■■■□□ 2.56
Vars2Q3U2A8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Vars2Q3U2A8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Vars2Q3U2A8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Vars2Q3U2A8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC31.02■■■□□ 2.56
Vars2Q3U2A8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Vars2Q3U2A8 Gm27502-201ENSMUST00000183495 199 ntBASIC31.01■■■□□ 2.55
Vars2Q3U2A8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC31.01■■■□□ 2.55
Vars2Q3U2A8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Vars2Q3U2A8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Vars2Q3U2A8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Vars2Q3U2A8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Vars2Q3U2A8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Vars2Q3U2A8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
Vars2Q3U2A8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Vars2Q3U2A8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC30.96■■■□□ 2.55
Vars2Q3U2A8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Vars2Q3U2A8 AC154454.1-201ENSMUST00000225253 216 ntBASIC30.93■■■□□ 2.54
Vars2Q3U2A8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC30.92■■■□□ 2.54
Vars2Q3U2A8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Vars2Q3U2A8 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.88■■■□□ 2.53
Vars2Q3U2A8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Vars2Q3U2A8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC30.87■■■□□ 2.53
Vars2Q3U2A8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC30.87■■■□□ 2.53
Vars2Q3U2A8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Vars2Q3U2A8 Gm5812-201ENSMUST00000061073 957 ntBASIC30.86■■■□□ 2.53
Vars2Q3U2A8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Vars2Q3U2A8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Vars2Q3U2A8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Vars2Q3U2A8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
Vars2Q3U2A8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Vars2Q3U2A8 Mir3960-201ENSMUST00000198213 73 ntBASIC30.84■■■□□ 2.53
Vars2Q3U2A8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC30.83■■■□□ 2.53
Vars2Q3U2A8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC30.83■■■□□ 2.53
Vars2Q3U2A8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
Vars2Q3U2A8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Vars2Q3U2A8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Vars2Q3U2A8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
Vars2Q3U2A8 Gm45364-201ENSMUST00000210883 159 ntBASIC30.8■■■□□ 2.52
Vars2Q3U2A8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Vars2Q3U2A8 Gm14523-201ENSMUST00000117260 558 ntBASIC30.79■■■□□ 2.52
Vars2Q3U2A8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC30.78■■■□□ 2.52
Vars2Q3U2A8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Vars2Q3U2A8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Vars2Q3U2A8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Vars2Q3U2A8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Vars2Q3U2A8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms