Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC13.7□□□□□ -0.22
Ush2AQ2QI47 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ush2AQ2QI47 Gm14523-201ENSMUST00000117260 558 ntBASIC13.7□□□□□ -0.22
Ush2AQ2QI47 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ush2AQ2QI47 Gm5921-201ENSMUST00000075898 882 ntBASIC13.69□□□□□ -0.22
Ush2AQ2QI47 Gm5067-201ENSMUST00000170449 1009 ntBASIC13.69□□□□□ -0.22
Ush2AQ2QI47 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ush2AQ2QI47 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ush2AQ2QI47 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ush2AQ2QI47 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC13.68□□□□□ -0.22
Ush2AQ2QI47 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ush2AQ2QI47 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ush2AQ2QI47 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ush2AQ2QI47 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ush2AQ2QI47 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Ush2AQ2QI47 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC13.66□□□□□ -0.22
Ush2AQ2QI47 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ush2AQ2QI47 AC153911.1-201ENSMUST00000220378 758 ntBASIC13.66□□□□□ -0.22
Ush2AQ2QI47 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ush2AQ2QI47 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ush2AQ2QI47 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC13.64□□□□□ -0.23
Ush2AQ2QI47 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC13.64□□□□□ -0.23
Ush2AQ2QI47 Gm5522-201ENSMUST00000189483 1242 ntBASIC13.64□□□□□ -0.23
Ush2AQ2QI47 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ush2AQ2QI47 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ush2AQ2QI47 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ush2AQ2QI47 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Ush2AQ2QI47 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ush2AQ2QI47 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ush2AQ2QI47 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ush2AQ2QI47 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ush2AQ2QI47 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ush2AQ2QI47 Rps24-207ENSMUST00000224568 714 ntBASIC13.6□□□□□ -0.23
Ush2AQ2QI47 Gm14117-201ENSMUST00000122417 843 ntBASIC13.6□□□□□ -0.23
Ush2AQ2QI47 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ush2AQ2QI47 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ush2AQ2QI47 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC13.6□□□□□ -0.23
Ush2AQ2QI47 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ush2AQ2QI47 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ush2AQ2QI47 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ush2AQ2QI47 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ush2AQ2QI47 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ush2AQ2QI47 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Ush2AQ2QI47 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ush2AQ2QI47 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.59□□□□□ -0.23
Ush2AQ2QI47 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ush2AQ2QI47 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ush2AQ2QI47 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ush2AQ2QI47 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ush2AQ2QI47 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ush2AQ2QI47 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ush2AQ2QI47 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ush2AQ2QI47 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Ush2AQ2QI47 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ush2AQ2QI47 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ush2AQ2QI47 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC13.56□□□□□ -0.24
Ush2AQ2QI47 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ush2AQ2QI47 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC13.55□□□□□ -0.24
Ush2AQ2QI47 Gm45102-201ENSMUST00000207427 857 ntBASIC13.55□□□□□ -0.24
Ush2AQ2QI47 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ush2AQ2QI47 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ush2AQ2QI47 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ush2AQ2QI47 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ush2AQ2QI47 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC13.54□□□□□ -0.24
Ush2AQ2QI47 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ush2AQ2QI47 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ush2AQ2QI47 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ush2AQ2QI47 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC13.53□□□□□ -0.24
Ush2AQ2QI47 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ush2AQ2QI47 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC13.52□□□□□ -0.24
Ush2AQ2QI47 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ush2AQ2QI47 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ush2AQ2QI47 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ush2AQ2QI47 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ush2AQ2QI47 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ush2AQ2QI47 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ush2AQ2QI47 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ush2AQ2QI47 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ush2AQ2QI47 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ush2AQ2QI47 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ush2AQ2QI47 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ush2AQ2QI47 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ush2AQ2QI47 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC13.51□□□□□ -0.25
Ush2AQ2QI47 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ush2AQ2QI47 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC13.5□□□□□ -0.25
Ush2AQ2QI47 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ush2AQ2QI47 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC13.49□□□□□ -0.25
Ush2AQ2QI47 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ush2AQ2QI47 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ush2AQ2QI47 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Ush2AQ2QI47 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ush2AQ2QI47 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ush2AQ2QI47 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC13.48□□□□□ -0.25
Ush2AQ2QI47 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ush2AQ2QI47 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ush2AQ2QI47 Gm45364-201ENSMUST00000210883 159 ntBASIC13.47□□□□□ -0.25
Ush2AQ2QI47 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ush2AQ2QI47 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ush2AQ2QI47 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ush2AQ2QI47 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms