Protein–RNA interactions for Protein: Q01705

Notch1, Neurogenic locus notch homolog protein 1, mousemouse

Predictions only

Length 2,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1Q01705 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Notch1Q01705 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Notch1Q01705 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.72■□□□□ 0.43
Notch1Q01705 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Notch1Q01705 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Notch1Q01705 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Notch1Q01705 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Notch1Q01705 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Notch1Q01705 Gm22567-201ENSMUST00000175542 342 ntBASIC17.7■□□□□ 0.42
Notch1Q01705 Gm4799-201ENSMUST00000095396 657 ntBASIC17.7■□□□□ 0.42
Notch1Q01705 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Notch1Q01705 Scarna2-201ENSMUST00000157560 414 ntBASIC17.69■□□□□ 0.42
Notch1Q01705 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Notch1Q01705 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Notch1Q01705 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Notch1Q01705 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Notch1Q01705 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.68■□□□□ 0.42
Notch1Q01705 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.68■□□□□ 0.42
Notch1Q01705 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Notch1Q01705 Gm11687-201ENSMUST00000118911 886 ntBASIC17.67■□□□□ 0.42
Notch1Q01705 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.67■□□□□ 0.42
Notch1Q01705 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Notch1Q01705 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Notch1Q01705 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Notch1Q01705 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
Notch1Q01705 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Notch1Q01705 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Notch1Q01705 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Notch1Q01705 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Notch1Q01705 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Notch1Q01705 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Notch1Q01705 Particl-201ENSMUST00000205370 1560 ntBASIC17.64■□□□□ 0.41
Notch1Q01705 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.64■□□□□ 0.41
Notch1Q01705 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Notch1Q01705 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.63■□□□□ 0.41
Notch1Q01705 Gm9806-201ENSMUST00000051080 552 ntBASIC17.63■□□□□ 0.41
Notch1Q01705 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Notch1Q01705 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Notch1Q01705 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Notch1Q01705 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.62■□□□□ 0.41
Notch1Q01705 Gm6658-202ENSMUST00000209493 1885 ntBASIC17.62■□□□□ 0.41
Notch1Q01705 Gm5812-201ENSMUST00000061073 957 ntBASIC17.62■□□□□ 0.41
Notch1Q01705 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Notch1Q01705 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.62■□□□□ 0.41
Notch1Q01705 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Notch1Q01705 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Notch1Q01705 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Notch1Q01705 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Notch1Q01705 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Notch1Q01705 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.6■□□□□ 0.41
Notch1Q01705 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.59■□□□□ 0.41
Notch1Q01705 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Notch1Q01705 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Notch1Q01705 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Notch1Q01705 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Notch1Q01705 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Notch1Q01705 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Notch1Q01705 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.58■□□□□ 0.41
Notch1Q01705 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Notch1Q01705 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Notch1Q01705 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Notch1Q01705 Gm16437-201ENSMUST00000025669 507 ntBASIC17.56■□□□□ 0.4
Notch1Q01705 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Notch1Q01705 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.56■□□□□ 0.4
Notch1Q01705 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Notch1Q01705 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Notch1Q01705 Gm7332-201ENSMUST00000118351 454 ntBASIC17.55■□□□□ 0.4
Notch1Q01705 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Notch1Q01705 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Notch1Q01705 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Notch1Q01705 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Notch1Q01705 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Notch1Q01705 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Notch1Q01705 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Notch1Q01705 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Notch1Q01705 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Notch1Q01705 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Notch1Q01705 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.52■□□□□ 0.39
Notch1Q01705 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Notch1Q01705 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Notch1Q01705 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Notch1Q01705 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Notch1Q01705 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Notch1Q01705 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Notch1Q01705 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Notch1Q01705 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.5■□□□□ 0.39
Notch1Q01705 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Notch1Q01705 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Notch1Q01705 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Notch1Q01705 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.48■□□□□ 0.39
Notch1Q01705 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Notch1Q01705 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Notch1Q01705 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Notch1Q01705 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
Notch1Q01705 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Notch1Q01705 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Notch1Q01705 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Notch1Q01705 Gm14523-201ENSMUST00000117260 558 ntBASIC17.46■□□□□ 0.38
Notch1Q01705 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Notch1Q01705 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms