Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Sec61a1P61620 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sec61a1P61620 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.75■□□□□ 0.91
Sec61a1P61620 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sec61a1P61620 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Sec61a1P61620 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.73■□□□□ 0.91
Sec61a1P61620 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sec61a1P61620 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Sec61a1P61620 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sec61a1P61620 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Sec61a1P61620 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sec61a1P61620 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Sec61a1P61620 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sec61a1P61620 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sec61a1P61620 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
Sec61a1P61620 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Sec61a1P61620 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.7■□□□□ 0.9
Sec61a1P61620 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sec61a1P61620 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.7■□□□□ 0.9
Sec61a1P61620 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Sec61a1P61620 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sec61a1P61620 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sec61a1P61620 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sec61a1P61620 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sec61a1P61620 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sec61a1P61620 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sec61a1P61620 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Sec61a1P61620 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sec61a1P61620 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sec61a1P61620 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Sec61a1P61620 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sec61a1P61620 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sec61a1P61620 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Sec61a1P61620 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sec61a1P61620 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sec61a1P61620 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sec61a1P61620 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.64■□□□□ 0.89
Sec61a1P61620 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Sec61a1P61620 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sec61a1P61620 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sec61a1P61620 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sec61a1P61620 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sec61a1P61620 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sec61a1P61620 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sec61a1P61620 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sec61a1P61620 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Sec61a1P61620 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Sec61a1P61620 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.6■□□□□ 0.89
Sec61a1P61620 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.6■□□□□ 0.89
Sec61a1P61620 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sec61a1P61620 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sec61a1P61620 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.59■□□□□ 0.89
Sec61a1P61620 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sec61a1P61620 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sec61a1P61620 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sec61a1P61620 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sec61a1P61620 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sec61a1P61620 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sec61a1P61620 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.57■□□□□ 0.88
Sec61a1P61620 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.57■□□□□ 0.88
Sec61a1P61620 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.56■□□□□ 0.88
Sec61a1P61620 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sec61a1P61620 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sec61a1P61620 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sec61a1P61620 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.55■□□□□ 0.88
Sec61a1P61620 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sec61a1P61620 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Sec61a1P61620 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sec61a1P61620 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sec61a1P61620 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sec61a1P61620 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Sec61a1P61620 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sec61a1P61620 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sec61a1P61620 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sec61a1P61620 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sec61a1P61620 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Sec61a1P61620 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sec61a1P61620 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sec61a1P61620 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Sec61a1P61620 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sec61a1P61620 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.51■□□□□ 0.87
Sec61a1P61620 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sec61a1P61620 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sec61a1P61620 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sec61a1P61620 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sec61a1P61620 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.49■□□□□ 0.87
Sec61a1P61620 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sec61a1P61620 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sec61a1P61620 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sec61a1P61620 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sec61a1P61620 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Sec61a1P61620 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sec61a1P61620 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sec61a1P61620 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sec61a1P61620 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.47■□□□□ 0.87
Sec61a1P61620 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sec61a1P61620 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sec61a1P61620 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sec61a1P61620 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Sec61a1P61620 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms