Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ercc1P07903 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ercc1P07903 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ercc1P07903 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Ercc1P07903 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ercc1P07903 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ercc1P07903 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ercc1P07903 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ercc1P07903 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ercc1P07903 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ercc1P07903 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ercc1P07903 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ercc1P07903 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ercc1P07903 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ercc1P07903 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ercc1P07903 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ercc1P07903 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ercc1P07903 Peli2-204ENSMUST00000226513 1320 ntBASIC19.77■□□□□ 0.76
Ercc1P07903 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ercc1P07903 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ercc1P07903 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ercc1P07903 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ercc1P07903 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ercc1P07903 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ercc1P07903 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ercc1P07903 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ercc1P07903 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ercc1P07903 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ercc1P07903 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ercc1P07903 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ercc1P07903 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ercc1P07903 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ercc1P07903 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ercc1P07903 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ercc1P07903 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ercc1P07903 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ercc1P07903 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ercc1P07903 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ercc1P07903 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ercc1P07903 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ercc1P07903 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ercc1P07903 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ercc1P07903 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ercc1P07903 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Ercc1P07903 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ercc1P07903 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ercc1P07903 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ercc1P07903 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.69■□□□□ 0.74
Ercc1P07903 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ercc1P07903 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Ercc1P07903 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ercc1P07903 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.69■□□□□ 0.74
Ercc1P07903 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ercc1P07903 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ercc1P07903 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ercc1P07903 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ercc1P07903 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ercc1P07903 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ercc1P07903 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ercc1P07903 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ercc1P07903 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ercc1P07903 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ercc1P07903 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ercc1P07903 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ercc1P07903 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ercc1P07903 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc1P07903 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc1P07903 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc1P07903 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc1P07903 Gm16148-201ENSMUST00000119653 893 ntBASIC19.64■□□□□ 0.73
Ercc1P07903 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ercc1P07903 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ercc1P07903 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ercc1P07903 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ercc1P07903 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ercc1P07903 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc1P07903 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc1P07903 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc1P07903 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc1P07903 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc1P07903 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ercc1P07903 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.62■□□□□ 0.73
Ercc1P07903 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc1P07903 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc1P07903 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc1P07903 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc1P07903 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc1P07903 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc1P07903 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ercc1P07903 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc1P07903 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc1P07903 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc1P07903 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.59■□□□□ 0.73
Ercc1P07903 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ercc1P07903 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.59■□□□□ 0.73
Ercc1P07903 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ercc1P07903 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ercc1P07903 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ercc1P07903 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ercc1P07903 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms