Protein–RNA interactions for Protein: P01728

Ig lambda-2 chain V region, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01728 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01728 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01728 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
P01728 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01728 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.87■□□□□ 0.61
P01728 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
P01728 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
P01728 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.86■□□□□ 0.61
P01728 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P01728 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
P01728 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
P01728 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01728 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
P01728 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
P01728 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
P01728 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01728 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01728 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01728 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01728 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
P01728 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01728 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01728 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
P01728 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01728 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01728 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
P01728 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
P01728 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
P01728 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01728 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01728 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01728 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01728 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
P01728 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
P01728 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
P01728 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.78■□□□□ 0.6
P01728 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.77■□□□□ 0.6
P01728 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P01728 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
P01728 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
P01728 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01728 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
P01728 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
P01728 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
P01728 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01728 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01728 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
P01728 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01728 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.74■□□□□ 0.59
P01728 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.74■□□□□ 0.59
P01728 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01728 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01728 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01728 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
P01728 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01728 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
P01728 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01728 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
P01728 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01728 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
P01728 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
P01728 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
P01728 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
P01728 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01728 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
P01728 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01728 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
P01728 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
P01728 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01728 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01728 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.68■□□□□ 0.58
P01728 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01728 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
P01728 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
P01728 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01728 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
P01728 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01728 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.67■□□□□ 0.58
P01728 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01728 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
P01728 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
P01728 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
P01728 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
P01728 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
P01728 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
P01728 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P01728 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P01728 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P01728 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
P01728 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
P01728 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P01728 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P01728 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.64■□□□□ 0.57
P01728 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
P01728 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
P01728 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P01728 Gm26115-201ENSMUST00000175605 87 ntBASIC18.63■□□□□ 0.57
P01728 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
P01728 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
P01728 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms