Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Syn1O88935 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Syn1O88935 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Syn1O88935 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC25.18■■□□□ 1.62
Syn1O88935 Gm22567-201ENSMUST00000175542 342 ntBASIC25.18■■□□□ 1.62
Syn1O88935 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC25.18■■□□□ 1.62
Syn1O88935 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Syn1O88935 Gm9806-201ENSMUST00000051080 552 ntBASIC25.18■■□□□ 1.62
Syn1O88935 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Syn1O88935 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Syn1O88935 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Syn1O88935 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Syn1O88935 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
Syn1O88935 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Syn1O88935 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
Syn1O88935 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Syn1O88935 Gm16437-201ENSMUST00000025669 507 ntBASIC25.15■■□□□ 1.62
Syn1O88935 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Syn1O88935 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Syn1O88935 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Syn1O88935 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.14■■□□□ 1.61
Syn1O88935 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Syn1O88935 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Syn1O88935 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Syn1O88935 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Syn1O88935 Gm7332-201ENSMUST00000118351 454 ntBASIC25.12■■□□□ 1.61
Syn1O88935 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Syn1O88935 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Syn1O88935 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.1■■□□□ 1.61
Syn1O88935 Particl-201ENSMUST00000205370 1560 ntBASIC25.09■■□□□ 1.61
Syn1O88935 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Syn1O88935 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Syn1O88935 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC25.07■■□□□ 1.6
Syn1O88935 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Syn1O88935 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Syn1O88935 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Syn1O88935 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Syn1O88935 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Syn1O88935 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Syn1O88935 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Syn1O88935 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Syn1O88935 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Syn1O88935 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Syn1O88935 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Syn1O88935 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Syn1O88935 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Syn1O88935 Gm27502-201ENSMUST00000183495 199 ntBASIC25.02■■□□□ 1.6
Syn1O88935 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Syn1O88935 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Syn1O88935 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Syn1O88935 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Syn1O88935 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC25.01■■□□□ 1.59
Syn1O88935 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Syn1O88935 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Syn1O88935 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Syn1O88935 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Syn1O88935 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Syn1O88935 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC24.98■■□□□ 1.59
Syn1O88935 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC24.98■■□□□ 1.59
Syn1O88935 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC24.97■■□□□ 1.59
Syn1O88935 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Syn1O88935 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC24.96■■□□□ 1.59
Syn1O88935 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Syn1O88935 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Syn1O88935 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
Syn1O88935 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Syn1O88935 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.93■■□□□ 1.58
Syn1O88935 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC24.93■■□□□ 1.58
Syn1O88935 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.93■■□□□ 1.58
Syn1O88935 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Syn1O88935 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.92■■□□□ 1.58
Syn1O88935 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Syn1O88935 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Syn1O88935 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.91■■□□□ 1.58
Syn1O88935 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
Syn1O88935 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
Syn1O88935 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Syn1O88935 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.89■■□□□ 1.58
Syn1O88935 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
Syn1O88935 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Syn1O88935 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Syn1O88935 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.87■■□□□ 1.57
Syn1O88935 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
Syn1O88935 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
Syn1O88935 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Syn1O88935 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Syn1O88935 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Syn1O88935 Gm5812-201ENSMUST00000061073 957 ntBASIC24.86■■□□□ 1.57
Syn1O88935 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Syn1O88935 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Syn1O88935 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Syn1O88935 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Syn1O88935 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
Syn1O88935 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Syn1O88935 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Syn1O88935 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Syn1O88935 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Syn1O88935 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Syn1O88935 Gm30023-201ENSMUST00000197970 889 ntBASIC24.8■■□□□ 1.56
Syn1O88935 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms