Protein–RNA interactions for Protein: F6XDR3

Gm10542, Predicted gene 10542, mousemouse

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10542F6XDR3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm10542F6XDR3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm10542F6XDR3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm10542F6XDR3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm10542F6XDR3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm10542F6XDR3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm10542F6XDR3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Gm10542F6XDR3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.47■□□□□ 0.23
Gm10542F6XDR3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16.47■□□□□ 0.23
Gm10542F6XDR3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm10542F6XDR3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Gm10542F6XDR3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Gm10542F6XDR3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Gm10542F6XDR3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC16.45■□□□□ 0.22
Gm10542F6XDR3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Gm10542F6XDR3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Gm10542F6XDR3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm10542F6XDR3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm10542F6XDR3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm10542F6XDR3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Gm10542F6XDR3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Gm10542F6XDR3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm10542F6XDR3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm10542F6XDR3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm10542F6XDR3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm10542F6XDR3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm10542F6XDR3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm10542F6XDR3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gm10542F6XDR3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm10542F6XDR3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm10542F6XDR3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.43■□□□□ 0.22
Gm10542F6XDR3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Gm10542F6XDR3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC16.42■□□□□ 0.22
Gm10542F6XDR3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm10542F6XDR3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm10542F6XDR3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm10542F6XDR3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm10542F6XDR3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm10542F6XDR3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm10542F6XDR3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm10542F6XDR3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm10542F6XDR3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm10542F6XDR3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm10542F6XDR3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC16.39■□□□□ 0.22
Gm10542F6XDR3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm10542F6XDR3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm10542F6XDR3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm10542F6XDR3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm10542F6XDR3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm10542F6XDR3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm10542F6XDR3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm10542F6XDR3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm10542F6XDR3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Gm10542F6XDR3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm10542F6XDR3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm10542F6XDR3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm10542F6XDR3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm10542F6XDR3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm10542F6XDR3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm10542F6XDR3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC16.36■□□□□ 0.21
Gm10542F6XDR3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Gm10542F6XDR3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC16.35■□□□□ 0.21
Gm10542F6XDR3 Gm16148-201ENSMUST00000119653 893 ntBASIC16.35■□□□□ 0.21
Gm10542F6XDR3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm10542F6XDR3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm10542F6XDR3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm10542F6XDR3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm10542F6XDR3 Gm24804-201ENSMUST00000174982 85 ntBASIC16.34■□□□□ 0.21
Gm10542F6XDR3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Gm10542F6XDR3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm10542F6XDR3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gm10542F6XDR3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gm10542F6XDR3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gm10542F6XDR3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gm10542F6XDR3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm10542F6XDR3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm10542F6XDR3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Gm10542F6XDR3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm10542F6XDR3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm10542F6XDR3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm10542F6XDR3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm10542F6XDR3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm10542F6XDR3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Gm10542F6XDR3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm10542F6XDR3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Gm10542F6XDR3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm10542F6XDR3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm10542F6XDR3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm10542F6XDR3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Gm10542F6XDR3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Gm10542F6XDR3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm10542F6XDR3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm10542F6XDR3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm10542F6XDR3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC16.26■□□□□ 0.19
Gm10542F6XDR3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm10542F6XDR3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm10542F6XDR3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm10542F6XDR3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Gm10542F6XDR3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm10542F6XDR3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms