Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.51■■□□□ 1.03
Gm3543D3Z235 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Gm3543D3Z235 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gm3543D3Z235 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Gm3543D3Z235 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gm3543D3Z235 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gm3543D3Z235 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gm3543D3Z235 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gm3543D3Z235 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Gm3543D3Z235 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
Gm3543D3Z235 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Gm3543D3Z235 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.48■■□□□ 1.03
Gm3543D3Z235 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gm3543D3Z235 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.48■■□□□ 1.03
Gm3543D3Z235 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Gm3543D3Z235 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.47■■□□□ 1.03
Gm3543D3Z235 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.47■■□□□ 1.03
Gm3543D3Z235 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gm3543D3Z235 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Gm3543D3Z235 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Gm3543D3Z235 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Gm3543D3Z235 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gm3543D3Z235 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm3543D3Z235 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm3543D3Z235 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.42■■□□□ 1.02
Gm3543D3Z235 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Gm3543D3Z235 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Gm3543D3Z235 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm3543D3Z235 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm3543D3Z235 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Gm3543D3Z235 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm3543D3Z235 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Gm3543D3Z235 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm3543D3Z235 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Gm3543D3Z235 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Gm3543D3Z235 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm3543D3Z235 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.39■■□□□ 1.01
Gm3543D3Z235 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Gm3543D3Z235 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm3543D3Z235 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm3543D3Z235 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Gm3543D3Z235 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm3543D3Z235 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm3543D3Z235 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Gm3543D3Z235 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Gm3543D3Z235 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Gm3543D3Z235 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.35■■□□□ 1.01
Gm3543D3Z235 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm3543D3Z235 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Gm3543D3Z235 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm3543D3Z235 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Gm3543D3Z235 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.33■■□□□ 1
Gm3543D3Z235 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gm3543D3Z235 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Gm3543D3Z235 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.32■■□□□ 1
Gm3543D3Z235 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm3543D3Z235 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
Gm3543D3Z235 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.31■■□□□ 1
Gm3543D3Z235 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm3543D3Z235 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm3543D3Z235 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm3543D3Z235 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Gm3543D3Z235 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Gm3543D3Z235 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Gm3543D3Z235 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Gm3543D3Z235 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Gm3543D3Z235 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.29■■□□□ 1
Gm3543D3Z235 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm3543D3Z235 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm3543D3Z235 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3543D3Z235 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Gm3543D3Z235 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.28■■□□□ 1
Gm3543D3Z235 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3543D3Z235 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3543D3Z235 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gm3543D3Z235 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gm3543D3Z235 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Gm3543D3Z235 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3543D3Z235 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3543D3Z235 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.26■□□□□ 0.99
Gm3543D3Z235 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gm3543D3Z235 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.25■□□□□ 0.99
Gm3543D3Z235 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.25■□□□□ 0.99
Gm3543D3Z235 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.25■□□□□ 0.99
Gm3543D3Z235 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm3543D3Z235 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Gm3543D3Z235 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm3543D3Z235 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm3543D3Z235 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Gm3543D3Z235 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Gm3543D3Z235 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Gm3543D3Z235 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3543D3Z235 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.23■□□□□ 0.99
Gm3543D3Z235 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3543D3Z235 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Gm3543D3Z235 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3543D3Z235 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.22■□□□□ 0.99
Gm3543D3Z235 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3543D3Z235 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3543D3Z235 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms