Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.43■□□□□ 0.38
Trdv2-1A0A0G2JGB9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trdv2-1A0A0G2JGB9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trdv2-1A0A0G2JGB9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.41■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.41■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trdv2-1A0A0G2JGB9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Trdv2-1A0A0G2JGB9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
Trdv2-1A0A0G2JGB9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.38■□□□□ 0.37
Trdv2-1A0A0G2JGB9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trdv2-1A0A0G2JGB9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.38■□□□□ 0.37
Trdv2-1A0A0G2JGB9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trdv2-1A0A0G2JGB9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trdv2-1A0A0G2JGB9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trdv2-1A0A0G2JGB9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trdv2-1A0A0G2JGB9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trdv2-1A0A0G2JGB9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trdv2-1A0A0G2JGB9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trdv2-1A0A0G2JGB9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trdv2-1A0A0G2JGB9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trdv2-1A0A0G2JGB9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trdv2-1A0A0G2JGB9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trdv2-1A0A0G2JGB9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trdv2-1A0A0G2JGB9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trdv2-1A0A0G2JGB9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trdv2-1A0A0G2JGB9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC17.34■□□□□ 0.37
Trdv2-1A0A0G2JGB9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trdv2-1A0A0G2JGB9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trdv2-1A0A0G2JGB9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trdv2-1A0A0G2JGB9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trdv2-1A0A0G2JGB9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
Trdv2-1A0A0G2JGB9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trdv2-1A0A0G2JGB9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trdv2-1A0A0G2JGB9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trdv2-1A0A0G2JGB9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trdv2-1A0A0G2JGB9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trdv2-1A0A0G2JGB9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.32■□□□□ 0.36
Trdv2-1A0A0G2JGB9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trdv2-1A0A0G2JGB9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.31■□□□□ 0.36
Trdv2-1A0A0G2JGB9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trdv2-1A0A0G2JGB9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC17.31■□□□□ 0.36
Trdv2-1A0A0G2JGB9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trdv2-1A0A0G2JGB9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trdv2-1A0A0G2JGB9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trdv2-1A0A0G2JGB9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trdv2-1A0A0G2JGB9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trdv2-1A0A0G2JGB9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trdv2-1A0A0G2JGB9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trdv2-1A0A0G2JGB9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trdv2-1A0A0G2JGB9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trdv2-1A0A0G2JGB9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Trdv2-1A0A0G2JGB9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trdv2-1A0A0G2JGB9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trdv2-1A0A0G2JGB9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trdv2-1A0A0G2JGB9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trdv2-1A0A0G2JGB9 Gm25262-201ENSMUST00000174934 133 ntBASIC17.27■□□□□ 0.36
Trdv2-1A0A0G2JGB9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC17.25■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trdv2-1A0A0G2JGB9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC17.23■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trdv2-1A0A0G2JGB9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trdv2-1A0A0G2JGB9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms