Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trbv20A0A0B4J1H5 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trbv20A0A0B4J1H5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Trbv20A0A0B4J1H5 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Trbv20A0A0B4J1H5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trbv20A0A0B4J1H5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trbv20A0A0B4J1H5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trbv20A0A0B4J1H5 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trbv20A0A0B4J1H5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trbv20A0A0B4J1H5 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trbv20A0A0B4J1H5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trbv20A0A0B4J1H5 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.36■■□□□ 1.01
Trbv20A0A0B4J1H5 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trbv20A0A0B4J1H5 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trbv20A0A0B4J1H5 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trbv20A0A0B4J1H5 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trbv20A0A0B4J1H5 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trbv20A0A0B4J1H5 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trbv20A0A0B4J1H5 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trbv20A0A0B4J1H5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trbv20A0A0B4J1H5 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trbv20A0A0B4J1H5 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trbv20A0A0B4J1H5 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trbv20A0A0B4J1H5 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Trbv20A0A0B4J1H5 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trbv20A0A0B4J1H5 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Trbv20A0A0B4J1H5 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.32■■□□□ 1
Trbv20A0A0B4J1H5 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trbv20A0A0B4J1H5 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trbv20A0A0B4J1H5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trbv20A0A0B4J1H5 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Trbv20A0A0B4J1H5 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trbv20A0A0B4J1H5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trbv20A0A0B4J1H5 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trbv20A0A0B4J1H5 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trbv20A0A0B4J1H5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Trbv20A0A0B4J1H5 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.3■■□□□ 1
Trbv20A0A0B4J1H5 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trbv20A0A0B4J1H5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
Trbv20A0A0B4J1H5 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trbv20A0A0B4J1H5 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trbv20A0A0B4J1H5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trbv20A0A0B4J1H5 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trbv20A0A0B4J1H5 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Trbv20A0A0B4J1H5 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trbv20A0A0B4J1H5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trbv20A0A0B4J1H5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trbv20A0A0B4J1H5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trbv20A0A0B4J1H5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Trbv20A0A0B4J1H5 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trbv20A0A0B4J1H5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trbv20A0A0B4J1H5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trbv20A0A0B4J1H5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trbv20A0A0B4J1H5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trbv20A0A0B4J1H5 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trbv20A0A0B4J1H5 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Trbv20A0A0B4J1H5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trbv20A0A0B4J1H5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Trbv20A0A0B4J1H5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trbv20A0A0B4J1H5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trbv20A0A0B4J1H5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trbv20A0A0B4J1H5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Trbv20A0A0B4J1H5 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Trbv20A0A0B4J1H5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.21■□□□□ 0.99
Trbv20A0A0B4J1H5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trbv20A0A0B4J1H5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Trbv20A0A0B4J1H5 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trbv20A0A0B4J1H5 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trbv20A0A0B4J1H5 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trbv20A0A0B4J1H5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trbv20A0A0B4J1H5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trbv20A0A0B4J1H5 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trbv20A0A0B4J1H5 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Trbv20A0A0B4J1H5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trbv20A0A0B4J1H5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.18■□□□□ 0.98
Trbv20A0A0B4J1H5 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trbv20A0A0B4J1H5 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Trbv20A0A0B4J1H5 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trbv20A0A0B4J1H5 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trbv20A0A0B4J1H5 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trbv20A0A0B4J1H5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.16■□□□□ 0.98
Trbv20A0A0B4J1H5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Trbv20A0A0B4J1H5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Trbv20A0A0B4J1H5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trbv20A0A0B4J1H5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trbv20A0A0B4J1H5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trbv20A0A0B4J1H5 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trbv20A0A0B4J1H5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trbv20A0A0B4J1H5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trbv20A0A0B4J1H5 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
Trbv20A0A0B4J1H5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Trbv20A0A0B4J1H5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trbv20A0A0B4J1H5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trbv20A0A0B4J1H5 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trbv20A0A0B4J1H5 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Trbv20A0A0B4J1H5 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.11■□□□□ 0.97
Trbv20A0A0B4J1H5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trbv20A0A0B4J1H5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trbv20A0A0B4J1H5 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trbv20A0A0B4J1H5 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms