Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.84■■□□□ 1.57
Pcdh7A0A0A6YY83 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdh7A0A0A6YY83 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Pcdh7A0A0A6YY83 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.83■■□□□ 1.57
Pcdh7A0A0A6YY83 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdh7A0A0A6YY83 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.81■■□□□ 1.56
Pcdh7A0A0A6YY83 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdh7A0A0A6YY83 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdh7A0A0A6YY83 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.8■■□□□ 1.56
Pcdh7A0A0A6YY83 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdh7A0A0A6YY83 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdh7A0A0A6YY83 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.79■■□□□ 1.56
Pcdh7A0A0A6YY83 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdh7A0A0A6YY83 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.78■■□□□ 1.56
Pcdh7A0A0A6YY83 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdh7A0A0A6YY83 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdh7A0A0A6YY83 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdh7A0A0A6YY83 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdh7A0A0A6YY83 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdh7A0A0A6YY83 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
Pcdh7A0A0A6YY83 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdh7A0A0A6YY83 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdh7A0A0A6YY83 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdh7A0A0A6YY83 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
Pcdh7A0A0A6YY83 Gm30023-201ENSMUST00000197970 889 ntBASIC24.76■■□□□ 1.55
Pcdh7A0A0A6YY83 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.76■■□□□ 1.55
Pcdh7A0A0A6YY83 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdh7A0A0A6YY83 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdh7A0A0A6YY83 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdh7A0A0A6YY83 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdh7A0A0A6YY83 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdh7A0A0A6YY83 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdh7A0A0A6YY83 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.72■■□□□ 1.55
Pcdh7A0A0A6YY83 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdh7A0A0A6YY83 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdh7A0A0A6YY83 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.71■■□□□ 1.55
Pcdh7A0A0A6YY83 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdh7A0A0A6YY83 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdh7A0A0A6YY83 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdh7A0A0A6YY83 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdh7A0A0A6YY83 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.69■■□□□ 1.54
Pcdh7A0A0A6YY83 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.68■■□□□ 1.54
Pcdh7A0A0A6YY83 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.67■■□□□ 1.54
Pcdh7A0A0A6YY83 Nkain2-201ENSMUST00000092602 558 ntBASIC24.67■■□□□ 1.54
Pcdh7A0A0A6YY83 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdh7A0A0A6YY83 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdh7A0A0A6YY83 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
Pcdh7A0A0A6YY83 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdh7A0A0A6YY83 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
Pcdh7A0A0A6YY83 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
Pcdh7A0A0A6YY83 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdh7A0A0A6YY83 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.64■■□□□ 1.54
Pcdh7A0A0A6YY83 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.64■■□□□ 1.54
Pcdh7A0A0A6YY83 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Pcdh7A0A0A6YY83 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Pcdh7A0A0A6YY83 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Pcdh7A0A0A6YY83 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdh7A0A0A6YY83 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdh7A0A0A6YY83 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdh7A0A0A6YY83 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
Pcdh7A0A0A6YY83 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Pcdh7A0A0A6YY83 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.63■■□□□ 1.53
Pcdh7A0A0A6YY83 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdh7A0A0A6YY83 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Pcdh7A0A0A6YY83 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdh7A0A0A6YY83 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdh7A0A0A6YY83 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdh7A0A0A6YY83 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdh7A0A0A6YY83 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.59■■□□□ 1.53
Pcdh7A0A0A6YY83 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
Pcdh7A0A0A6YY83 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.59■■□□□ 1.53
Pcdh7A0A0A6YY83 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdh7A0A0A6YY83 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdh7A0A0A6YY83 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.58■■□□□ 1.53
Pcdh7A0A0A6YY83 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdh7A0A0A6YY83 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdh7A0A0A6YY83 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.56■■□□□ 1.52
Pcdh7A0A0A6YY83 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Pcdh7A0A0A6YY83 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.55■■□□□ 1.52
Pcdh7A0A0A6YY83 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdh7A0A0A6YY83 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdh7A0A0A6YY83 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdh7A0A0A6YY83 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Pcdh7A0A0A6YY83 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdh7A0A0A6YY83 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Pcdh7A0A0A6YY83 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdh7A0A0A6YY83 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdh7A0A0A6YY83 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdh7A0A0A6YY83 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdh7A0A0A6YY83 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdh7A0A0A6YY83 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.51■■□□□ 1.51
Pcdh7A0A0A6YY83 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdh7A0A0A6YY83 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdh7A0A0A6YY83 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Pcdh7A0A0A6YY83 Gm6821-201ENSMUST00000107540 542 ntBASIC24.49■■□□□ 1.51
Pcdh7A0A0A6YY83 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdh7A0A0A6YY83 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdh7A0A0A6YY83 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Pcdh7A0A0A6YY83 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdh7A0A0A6YY83 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms