Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav14n-3A0A075B645 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav14n-3A0A075B645 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trav14n-3A0A075B645 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trav14n-3A0A075B645 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav14n-3A0A075B645 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav14n-3A0A075B645 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trav14n-3A0A075B645 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC17.95■□□□□ 0.46
Trav14n-3A0A075B645 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav14n-3A0A075B645 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav14n-3A0A075B645 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Trav14n-3A0A075B645 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav14n-3A0A075B645 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.93■□□□□ 0.46
Trav14n-3A0A075B645 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav14n-3A0A075B645 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav14n-3A0A075B645 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav14n-3A0A075B645 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav14n-3A0A075B645 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav14n-3A0A075B645 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav14n-3A0A075B645 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav14n-3A0A075B645 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trav14n-3A0A075B645 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav14n-3A0A075B645 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav14n-3A0A075B645 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trav14n-3A0A075B645 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trav14n-3A0A075B645 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav14n-3A0A075B645 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav14n-3A0A075B645 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav14n-3A0A075B645 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trav14n-3A0A075B645 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav14n-3A0A075B645 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Trav14n-3A0A075B645 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav14n-3A0A075B645 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav14n-3A0A075B645 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav14n-3A0A075B645 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav14n-3A0A075B645 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav14n-3A0A075B645 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav14n-3A0A075B645 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav14n-3A0A075B645 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav14n-3A0A075B645 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav14n-3A0A075B645 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav14n-3A0A075B645 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav14n-3A0A075B645 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav14n-3A0A075B645 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trav14n-3A0A075B645 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav14n-3A0A075B645 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav14n-3A0A075B645 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav14n-3A0A075B645 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav14n-3A0A075B645 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav14n-3A0A075B645 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav14n-3A0A075B645 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
Trav14n-3A0A075B645 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav14n-3A0A075B645 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav14n-3A0A075B645 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trav14n-3A0A075B645 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav14n-3A0A075B645 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav14n-3A0A075B645 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.84■□□□□ 0.45
Trav14n-3A0A075B645 Gm27322-201ENSMUST00000184007 104 ntBASIC17.84■□□□□ 0.45
Trav14n-3A0A075B645 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC17.84■□□□□ 0.45
Trav14n-3A0A075B645 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.84■□□□□ 0.45
Trav14n-3A0A075B645 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.84■□□□□ 0.45
Trav14n-3A0A075B645 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trav14n-3A0A075B645 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trav14n-3A0A075B645 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Trav14n-3A0A075B645 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav14n-3A0A075B645 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav14n-3A0A075B645 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Trav14n-3A0A075B645 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav14n-3A0A075B645 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav14n-3A0A075B645 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Trav14n-3A0A075B645 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav14n-3A0A075B645 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav14n-3A0A075B645 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.81■□□□□ 0.44
Trav14n-3A0A075B645 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Trav14n-3A0A075B645 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav14n-3A0A075B645 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trav14n-3A0A075B645 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Trav14n-3A0A075B645 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Trav14n-3A0A075B645 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trav14n-3A0A075B645 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav14n-3A0A075B645 Gm17082-201ENSMUST00000166043 1091 ntBASIC17.8■□□□□ 0.44
Trav14n-3A0A075B645 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trav14n-3A0A075B645 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trav14n-3A0A075B645 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav14n-3A0A075B645 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav14n-3A0A075B645 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav14n-3A0A075B645 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav14n-3A0A075B645 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav14n-3A0A075B645 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav14n-3A0A075B645 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav14n-3A0A075B645 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trav14n-3A0A075B645 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav14n-3A0A075B645 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Trav14n-3A0A075B645 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav14n-3A0A075B645 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav14n-3A0A075B645 Gm25262-201ENSMUST00000174934 133 ntBASIC17.76■□□□□ 0.43
Trav14n-3A0A075B645 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav14n-3A0A075B645 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.76■□□□□ 0.43
Trav14n-3A0A075B645 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trav14n-3A0A075B645 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms