Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col18a1P39061 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC5.06□□□□□ -1.6
Col18a1P39061 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Col18a1P39061 Gm13378-201ENSMUST00000117483 336 ntBASIC5.06□□□□□ -1.6
Col18a1P39061 Gm7308-201ENSMUST00000121087 447 ntBASIC5.06□□□□□ -1.6
Col18a1P39061 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC5.06□□□□□ -1.6
Col18a1P39061 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC5.06□□□□□ -1.6
Col18a1P39061 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC5.06□□□□□ -1.6
Col18a1P39061 Trbv10-201ENSMUST00000168322 289 ntBASIC5.06□□□□□ -1.6
Col18a1P39061 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC5.06□□□□□ -1.6
Col18a1P39061 Gm43723-201ENSMUST00000196886 189 ntBASIC5.06□□□□□ -1.6
Col18a1P39061 Gm45048-201ENSMUST00000207058 429 ntBASIC5.06□□□□□ -1.6
Col18a1P39061 Gm45327-201ENSMUST00000211612 565 ntBASIC5.06□□□□□ -1.6
Col18a1P39061 AC144783.2-201ENSMUST00000219089 195 ntBASIC5.06□□□□□ -1.6
Col18a1P39061 Gm7540-201ENSMUST00000219764 926 ntBASIC5.06□□□□□ -1.6
Col18a1P39061 AC131029.2-202ENSMUST00000228430 496 ntBASIC5.06□□□□□ -1.6
Col18a1P39061 Gm43923-201ENSMUST00000203992 2911 ntBASIC5.06□□□□□ -1.6
Col18a1P39061 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col18a1P39061 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Col18a1P39061 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Col18a1P39061 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.05□□□□□ -1.6
Col18a1P39061 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col18a1P39061 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col18a1P39061 Gm44288-201ENSMUST00000205061 2795 ntBASIC5.05□□□□□ -1.6
Col18a1P39061 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col18a1P39061 Gm12760-201ENSMUST00000117861 482 ntBASIC5.05□□□□□ -1.6
Col18a1P39061 Gm2768-201ENSMUST00000121062 250 ntBASIC5.05□□□□□ -1.6
Col18a1P39061 Gm11965-201ENSMUST00000122017 277 ntBASIC5.05□□□□□ -1.6
Col18a1P39061 Gm14364-201ENSMUST00000129209 267 ntBASIC5.05□□□□□ -1.6
Col18a1P39061 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC5.05□□□□□ -1.6
Col18a1P39061 Gm24441-201ENSMUST00000157235 281 ntBASIC5.05□□□□□ -1.6
Col18a1P39061 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col18a1P39061 Gm6501-201ENSMUST00000187178 916 ntBASIC5.05□□□□□ -1.6
Col18a1P39061 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC5.05□□□□□ -1.6
Col18a1P39061 Gm18696-201ENSMUST00000220103 274 ntBASIC5.05□□□□□ -1.6
Col18a1P39061 Gm20102-201ENSMUST00000222445 220 ntBASIC5.05□□□□□ -1.6
Col18a1P39061 AC133156.1-202ENSMUST00000227284 363 ntBASIC5.05□□□□□ -1.6
Col18a1P39061 Gm10916-201ENSMUST00000080330 483 ntBASIC5.05□□□□□ -1.6
Col18a1P39061 Gm24917-201ENSMUST00000083935 104 ntBASIC5.05□□□□□ -1.6
Col18a1P39061 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC5.05□□□□□ -1.6
Col18a1P39061 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col18a1P39061 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Col18a1P39061 Gm22322-201ENSMUST00000157151 111 ntBASIC5.04□□□□□ -1.6
Col18a1P39061 Gm23901-201ENSMUST00000157570 107 ntBASIC5.04□□□□□ -1.6
Col18a1P39061 Gm3030-201ENSMUST00000163410 516 ntBASIC5.04□□□□□ -1.6
Col18a1P39061 Gm22259-201ENSMUST00000178926 107 ntBASIC5.04□□□□□ -1.6
Col18a1P39061 Gm27660-201ENSMUST00000184028 208 ntBASIC5.04□□□□□ -1.6
Col18a1P39061 Gm10105-201ENSMUST00000184601 270 ntBASIC5.04□□□□□ -1.6
Col18a1P39061 Gm5829-201ENSMUST00000191383 351 ntBASIC5.04□□□□□ -1.6
Col18a1P39061 Gm18551-201ENSMUST00000195594 642 ntBASIC5.04□□□□□ -1.6
Col18a1P39061 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col18a1P39061 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC5.04□□□□□ -1.6
Col18a1P39061 AC121966.1-201ENSMUST00000221458 282 ntBASIC5.04□□□□□ -1.6
Col18a1P39061 Gm23407-201ENSMUST00000082538 91 ntBASIC5.04□□□□□ -1.6
Col18a1P39061 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Col18a1P39061 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col18a1P39061 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.04□□□□□ -1.6
Col18a1P39061 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
Col18a1P39061 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col18a1P39061 AC159193.2-201ENSMUST00000220865 4251 ntBASIC5.04□□□□□ -1.6
Col18a1P39061 Gm15084-201ENSMUST00000178585 1502 ntBASIC5.04□□□□□ -1.6
Col18a1P39061 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col18a1P39061 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
Col18a1P39061 n-R5s31-201ENSMUST00000104162 110 ntBASIC5.04□□□□□ -1.6
Col18a1P39061 Gm14926-201ENSMUST00000120650 508 ntBASIC5.04□□□□□ -1.6
Col18a1P39061 Gm13557-201ENSMUST00000120771 382 ntBASIC5.04□□□□□ -1.6
Col18a1P39061 Gm14577-201ENSMUST00000121134 256 ntBASIC5.04□□□□□ -1.6
Col18a1P39061 Gm14559-201ENSMUST00000121745 496 ntBASIC5.04□□□□□ -1.6
Col18a1P39061 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC5.04□□□□□ -1.6
Col18a1P39061 Gm25362-201ENSMUST00000158854 105 ntBASIC5.04□□□□□ -1.6
Col18a1P39061 Gm27851-201ENSMUST00000183529 63 ntBASIC5.04□□□□□ -1.6
Col18a1P39061 Gm27254-201ENSMUST00000183926 517 ntBASIC5.04□□□□□ -1.6
Col18a1P39061 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.04□□□□□ -1.6
Col18a1P39061 Gm5983-201ENSMUST00000197739 770 ntBASIC5.04□□□□□ -1.6
Col18a1P39061 Gm44336-201ENSMUST00000203696 468 ntBASIC5.04□□□□□ -1.6
Col18a1P39061 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col18a1P39061 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Col18a1P39061 Gm25482-201ENSMUST00000083225 107 ntBASIC5.04□□□□□ -1.6
Col18a1P39061 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col18a1P39061 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col18a1P39061 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Col18a1P39061 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col18a1P39061 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Col18a1P39061 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col18a1P39061 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col18a1P39061 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col18a1P39061 Gm24605-201ENSMUST00000104772 96 ntBASIC5.03□□□□□ -1.6
Col18a1P39061 Gm14558-201ENSMUST00000117458 381 ntBASIC5.03□□□□□ -1.6
Col18a1P39061 Gm6893-201ENSMUST00000118385 522 ntBASIC5.03□□□□□ -1.6
Col18a1P39061 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC5.03□□□□□ -1.6
Col18a1P39061 Gm15466-201ENSMUST00000122299 333 ntBASIC5.03□□□□□ -1.6
Col18a1P39061 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC5.03□□□□□ -1.6
Col18a1P39061 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col18a1P39061 Gm25920-201ENSMUST00000158307 99 ntBASIC5.03□□□□□ -1.6
Col18a1P39061 Gm24676-201ENSMUST00000158758 75 ntBASIC5.03□□□□□ -1.6
Col18a1P39061 Gm16303-201ENSMUST00000161498 390 ntBASIC5.03□□□□□ -1.6
Col18a1P39061 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC5.03□□□□□ -1.6
Col18a1P39061 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC5.03□□□□□ -1.6
Col18a1P39061 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC5.03□□□□□ -1.6
Col18a1P39061 Mir7227-201ENSMUST00000200408 59 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 150.7 ms