Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm45093-201ENSMUST00000206859 2463 ntBASIC5.09□□□□□ -1.59
Col18a1P39061 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC5.09□□□□□ -1.59
Col18a1P39061 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
Col18a1P39061 Gm25308-201ENSMUST00000104171 158 ntBASIC5.09□□□□□ -1.6
Col18a1P39061 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Col18a1P39061 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC5.09□□□□□ -1.6
Col18a1P39061 Gm22538-201ENSMUST00000158169 299 ntBASIC5.09□□□□□ -1.6
Col18a1P39061 Gm17421-201ENSMUST00000167845 674 ntBASIC5.09□□□□□ -1.6
Col18a1P39061 Mir5624-201ENSMUST00000176635 61 ntBASIC5.09□□□□□ -1.6
Col18a1P39061 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
Col18a1P39061 Gm25451-201ENSMUST00000177832 121 ntBASIC5.09□□□□□ -1.6
Col18a1P39061 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC5.09□□□□□ -1.6
Col18a1P39061 Gm27385-201ENSMUST00000184747 104 ntBASIC5.09□□□□□ -1.6
Col18a1P39061 Gm19280-201ENSMUST00000190191 205 ntBASIC5.09□□□□□ -1.6
Col18a1P39061 AC093926.1-201ENSMUST00000213730 243 ntBASIC5.09□□□□□ -1.6
Col18a1P39061 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Col18a1P39061 Snord15a-201ENSMUST00000083888 148 ntBASIC5.09□□□□□ -1.6
Col18a1P39061 Gm24817-201ENSMUST00000093672 105 ntBASIC5.09□□□□□ -1.6
Col18a1P39061 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
Col18a1P39061 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC5.08□□□□□ -1.6
Col18a1P39061 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col18a1P39061 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col18a1P39061 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col18a1P39061 Gm42680-201ENSMUST00000196238 2500 ntBASIC5.08□□□□□ -1.6
Col18a1P39061 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Col18a1P39061 Gm14835-201ENSMUST00000119039 315 ntBASIC5.08□□□□□ -1.6
Col18a1P39061 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC5.08□□□□□ -1.6
Col18a1P39061 Gm22791-201ENSMUST00000157232 145 ntBASIC5.08□□□□□ -1.6
Col18a1P39061 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC5.08□□□□□ -1.6
Col18a1P39061 Fth-ps2-201ENSMUST00000168364 516 ntBASIC5.08□□□□□ -1.6
Col18a1P39061 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Col18a1P39061 Gm23793-201ENSMUST00000179396 117 ntBASIC5.08□□□□□ -1.6
Col18a1P39061 Gm28871-201ENSMUST00000186191 687 ntBASIC5.08□□□□□ -1.6
Col18a1P39061 CT025157.1-201ENSMUST00000226241 292 ntBASIC5.08□□□□□ -1.6
Col18a1P39061 Gm7204-201ENSMUST00000062591 600 ntBASIC5.08□□□□□ -1.6
Col18a1P39061 Gm8724-201ENSMUST00000081668 483 ntBASIC5.08□□□□□ -1.6
Col18a1P39061 Snord68-201ENSMUST00000082516 86 ntBASIC5.08□□□□□ -1.6
Col18a1P39061 Gm23412-201ENSMUST00000083017 107 ntBASIC5.08□□□□□ -1.6
Col18a1P39061 Gm26072-201ENSMUST00000083135 107 ntBASIC5.08□□□□□ -1.6
Col18a1P39061 AC124572.2-201ENSMUST00000218041 5152 ntBASIC5.08□□□□□ -1.6
Col18a1P39061 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col18a1P39061 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col18a1P39061 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Col18a1P39061 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
Col18a1P39061 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col18a1P39061 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col18a1P39061 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col18a1P39061 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Col18a1P39061 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col18a1P39061 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Col18a1P39061 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col18a1P39061 Gm36944-201ENSMUST00000192257 2759 ntBASIC5.07□□□□□ -1.6
Col18a1P39061 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col18a1P39061 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC5.07□□□□□ -1.6
Col18a1P39061 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col18a1P39061 Gm23530-201ENSMUST00000104564 137 ntBASIC5.07□□□□□ -1.6
Col18a1P39061 Gm12765-201ENSMUST00000117273 615 ntBASIC5.07□□□□□ -1.6
Col18a1P39061 Gm14428-201ENSMUST00000120408 822 ntBASIC5.07□□□□□ -1.6
Col18a1P39061 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC5.07□□□□□ -1.6
Col18a1P39061 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC5.07□□□□□ -1.6
Col18a1P39061 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC5.07□□□□□ -1.6
Col18a1P39061 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC5.07□□□□□ -1.6
Col18a1P39061 Gm36382-201ENSMUST00000198892 541 ntBASIC5.07□□□□□ -1.6
Col18a1P39061 Gm43651-201ENSMUST00000199796 439 ntBASIC5.07□□□□□ -1.6
Col18a1P39061 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC5.07□□□□□ -1.6
Col18a1P39061 Gm45439-201ENSMUST00000211723 359 ntBASIC5.07□□□□□ -1.6
Col18a1P39061 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC5.07□□□□□ -1.6
Col18a1P39061 AC126690.1-201ENSMUST00000228898 397 ntBASIC5.07□□□□□ -1.6
Col18a1P39061 Snord35b-201ENSMUST00000082833 87 ntBASIC5.07□□□□□ -1.6
Col18a1P39061 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col18a1P39061 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col18a1P39061 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col18a1P39061 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col18a1P39061 Gm5117-201ENSMUST00000178878 2553 ntBASIC5.07□□□□□ -1.6
Col18a1P39061 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col18a1P39061 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col18a1P39061 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col18a1P39061 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Col18a1P39061 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col18a1P39061 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Col18a1P39061 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col18a1P39061 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Col18a1P39061 Gm15994-201ENSMUST00000118029 402 ntBASIC5.06□□□□□ -1.6
Col18a1P39061 Gm13880-201ENSMUST00000118421 474 ntBASIC5.06□□□□□ -1.6
Col18a1P39061 Gm24936-201ENSMUST00000122598 247 ntBASIC5.06□□□□□ -1.6
Col18a1P39061 Gm17162-201ENSMUST00000168538 473 ntBASIC5.06□□□□□ -1.6
Col18a1P39061 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC5.06□□□□□ -1.6
Col18a1P39061 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC5.06□□□□□ -1.6
Col18a1P39061 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Col18a1P39061 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC5.06□□□□□ -1.6
Col18a1P39061 Igkv15-102-201ENSMUST00000197885 287 ntBASIC5.06□□□□□ -1.6
Col18a1P39061 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Col18a1P39061 AV026068-237ENSMUST00000226075 572 ntBASIC5.06□□□□□ -1.6
Col18a1P39061 AC165284.1-201ENSMUST00000228614 458 ntBASIC5.06□□□□□ -1.6
Col18a1P39061 Gm24037-201ENSMUST00000082871 180 ntBASIC5.06□□□□□ -1.6
Col18a1P39061 Defa-ps18-201ENSMUST00000098889 371 ntBASIC5.06□□□□□ -1.6
Col18a1P39061 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col18a1P39061 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col18a1P39061 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col18a1P39061 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 157 ms