Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm28956-201ENSMUST00000189047 427 ntBASIC3.49□□□□□ -1.85
Trim58Q5NCC9 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Trim58Q5NCC9 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC3.49□□□□□ -1.85
Trim58Q5NCC9 Gm37418-201ENSMUST00000195031 274 ntBASIC3.49□□□□□ -1.85
Trim58Q5NCC9 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC3.49□□□□□ -1.85
Trim58Q5NCC9 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.49□□□□□ -1.85
Trim58Q5NCC9 Gm18748-201ENSMUST00000198507 622 ntBASIC3.49□□□□□ -1.85
Trim58Q5NCC9 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Trim58Q5NCC9 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.49□□□□□ -1.85
Trim58Q5NCC9 AC159297.2-201ENSMUST00000219567 1075 ntBASIC3.49□□□□□ -1.85
Trim58Q5NCC9 AC154552.5-201ENSMUST00000222352 207 ntBASIC3.49□□□□□ -1.85
Trim58Q5NCC9 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.49□□□□□ -1.85
Trim58Q5NCC9 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.49□□□□□ -1.85
Trim58Q5NCC9 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Trim58Q5NCC9 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Trim58Q5NCC9 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Trim58Q5NCC9 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Trim58Q5NCC9 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Trim58Q5NCC9 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.49□□□□□ -1.85
Trim58Q5NCC9 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.49□□□□□ -1.85
Trim58Q5NCC9 Gm9496-201ENSMUST00000191295 1601 ntBASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Gm9009-201ENSMUST00000117321 326 ntBASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Gm14197-201ENSMUST00000117480 1049 ntBASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Gm14913-201ENSMUST00000120011 1093 ntBASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Gm11835-201ENSMUST00000120635 663 ntBASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Gm22143-201ENSMUST00000157401 203 ntBASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Gm26349-201ENSMUST00000157530 130 ntBASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Gm17655-201ENSMUST00000167969 255 ntBASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Gm8649-201ENSMUST00000181799 233 ntBASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Mir7242-201ENSMUST00000183710 79 ntBASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC3.48□□□□□ -1.85
Trim58Q5NCC9 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Gm28314-201ENSMUST00000191276 345 ntBASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Gm38333-201ENSMUST00000193608 604 ntBASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Gm43521-201ENSMUST00000197838 255 ntBASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Gm43107-201ENSMUST00000198729 255 ntBASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Gm44135-201ENSMUST00000205221 368 ntBASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Gm18729-201ENSMUST00000217230 621 ntBASIC3.48□□□□□ -1.85
Trim58Q5NCC9 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.48□□□□□ -1.85
Trim58Q5NCC9 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.48□□□□□ -1.85
Trim58Q5NCC9 AC124569.1-201ENSMUST00000225932 101 ntBASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Gm9818-201ENSMUST00000050900 255 ntBASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Trim58Q5NCC9 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Gm23297-201ENSMUST00000083184 127 ntBASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Gm23264-201ENSMUST00000083372 107 ntBASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Trim58Q5NCC9 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC3.47□□□□□ -1.85
Trim58Q5NCC9 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC3.47□□□□□ -1.85
Trim58Q5NCC9 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC3.47□□□□□ -1.85
Trim58Q5NCC9 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.47□□□□□ -1.85
Trim58Q5NCC9 Gm6182-201ENSMUST00000156439 1208 ntBASIC3.47□□□□□ -1.85
Trim58Q5NCC9 Gm22141-201ENSMUST00000157403 277 ntBASIC3.47□□□□□ -1.85
Trim58Q5NCC9 Gm25224-201ENSMUST00000158195 68 ntBASIC3.47□□□□□ -1.85
Trim58Q5NCC9 Gm24879-201ENSMUST00000158386 143 ntBASIC3.47□□□□□ -1.85
Trim58Q5NCC9 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Trim58Q5NCC9 Gm9613-201ENSMUST00000171662 196 ntBASIC3.47□□□□□ -1.85
Trim58Q5NCC9 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC3.47□□□□□ -1.85
Trim58Q5NCC9 Gm25942-201ENSMUST00000180080 110 ntBASIC3.47□□□□□ -1.85
Trim58Q5NCC9 Gm27964-201ENSMUST00000185195 62 ntBASIC3.47□□□□□ -1.85
Trim58Q5NCC9 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC3.47□□□□□ -1.85
Trim58Q5NCC9 Gm37987-201ENSMUST00000194999 825 ntBASIC3.47□□□□□ -1.85
Trim58Q5NCC9 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Trim58Q5NCC9 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3.47□□□□□ -1.85
Trim58Q5NCC9 Gm17893-201ENSMUST00000203017 770 ntBASIC3.47□□□□□ -1.85
Trim58Q5NCC9 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC3.47□□□□□ -1.85
Trim58Q5NCC9 Gm22829-201ENSMUST00000083771 106 ntBASIC3.47□□□□□ -1.85
Trim58Q5NCC9 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Trim58Q5NCC9 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Trim58Q5NCC9 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Trim58Q5NCC9 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.47□□□□□ -1.85
Trim58Q5NCC9 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
Trim58Q5NCC9 Gm19074-201ENSMUST00000218915 1429 ntBASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Gm6913-201ENSMUST00000100019 348 ntBASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Gm25500-201ENSMUST00000104426 123 ntBASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Gm22488-201ENSMUST00000116811 127 ntBASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Gm11252-201ENSMUST00000120572 939 ntBASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Gm7308-201ENSMUST00000121087 447 ntBASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Gm14506-201ENSMUST00000121165 536 ntBASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Gm22345-201ENSMUST00000122644 107 ntBASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Gm25280-201ENSMUST00000157269 101 ntBASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Gm23034-201ENSMUST00000158001 147 ntBASIC3.46□□□□□ -1.86
Trim58Q5NCC9 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Gm17085-201ENSMUST00000165425 502 ntBASIC3.46□□□□□ -1.86
Trim58Q5NCC9 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 127.3 ms