Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 AC158142.2-201ENSMUST00000227892 635 ntBASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Gm10237-201ENSMUST00000078393 273 ntBASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Gm20541-201ENSMUST00000173035 1406 ntBASIC3.02□□□□□ -1.93
Trim3Q9R1R2 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Trim3Q9R1R2 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Gm15037-201ENSMUST00000120358 259 ntBASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Gm22026-201ENSMUST00000122735 281 ntBASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Gm22818-201ENSMUST00000157446 104 ntBASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Gm22769-201ENSMUST00000158367 98 ntBASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Gm22532-201ENSMUST00000158822 140 ntBASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Mir5136-201ENSMUST00000175573 76 ntBASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Gm27374-201ENSMUST00000183660 81 ntBASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Gm27428-201ENSMUST00000184289 110 ntBASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Npn2-202ENSMUST00000189275 235 ntBASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Gm29288-201ENSMUST00000191582 901 ntBASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Gm18026-201ENSMUST00000222789 727 ntBASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC3.01□□□□□ -1.93
Trim3Q9R1R2 AC153646.1-201ENSMUST00000223229 1279 ntBASIC3.01□□□□□ -1.93
Trim3Q9R1R2 AC131085.1-201ENSMUST00000224746 656 ntBASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Trim3Q9R1R2 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trim3Q9R1R2 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3□□□□□ -1.93
Trim3Q9R1R2 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Trim3Q9R1R2 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm17976-201ENSMUST00000184037 1909 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm3940-201ENSMUST00000105087 432 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm15110-201ENSMUST00000117545 881 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm15282-201ENSMUST00000117707 300 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm9119-201ENSMUST00000118866 495 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm12897-201ENSMUST00000120341 250 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm13210-201ENSMUST00000121483 273 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm15065-201ENSMUST00000121699 273 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm6762-201ENSMUST00000121769 289 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm22817-201ENSMUST00000157448 356 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm22722-201ENSMUST00000157467 132 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm22833-201ENSMUST00000158292 132 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm25902-201ENSMUST00000158493 318 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm23028-201ENSMUST00000158773 265 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC3□□□□□ -1.93
Trim3Q9R1R2 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm27999-201ENSMUST00000183539 193 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm28314-201ENSMUST00000191276 345 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm43043-201ENSMUST00000196579 412 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3□□□□□ -1.93
Trim3Q9R1R2 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 Mir3073b-201ENSMUST00000199383 60 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC3□□□□□ -1.93
Trim3Q9R1R2 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3□□□□□ -1.93
Trim3Q9R1R2 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm18892-201ENSMUST00000217628 881 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 CT010455.1-201ENSMUST00000218579 413 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm9973-202ENSMUST00000220926 166 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 AC121966.1-201ENSMUST00000221458 282 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 AC122484.1-201ENSMUST00000221578 177 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 AC154224.1-201ENSMUST00000224367 403 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 AC168062.2-201ENSMUST00000228907 422 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm9765-201ENSMUST00000043170 321 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm23738-201ENSMUST00000082828 171 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm43498-201ENSMUST00000202002 1486 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm14404-201ENSMUST00000119117 1660 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
Trim3Q9R1R2 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trim3Q9R1R2 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3□□□□□ -1.93
Trim3Q9R1R2 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm6207-201ENSMUST00000120075 1386 ntBASIC3□□□□□ -1.93
Trim3Q9R1R2 Gm6228-201ENSMUST00000178856 1386 ntBASIC3□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 205.4 ms