Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.56□□□□□ -1.68
Brf1Q8CFK2 AC120553.1-201ENSMUST00000227313 260 ntBASIC4.56□□□□□ -1.68
Brf1Q8CFK2 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Brf1Q8CFK2 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Brf1Q8CFK2 Gm23093-201ENSMUST00000083450 102 ntBASIC4.56□□□□□ -1.68
Brf1Q8CFK2 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Brf1Q8CFK2 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Brf1Q8CFK2 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Brf1Q8CFK2 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.56□□□□□ -1.68
Brf1Q8CFK2 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Brf1Q8CFK2 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Brf1Q8CFK2 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Brf1Q8CFK2 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC4.56□□□□□ -1.68
Brf1Q8CFK2 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Brf1Q8CFK2 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Brf1Q8CFK2 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Brf1Q8CFK2 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC4.56□□□□□ -1.68
Brf1Q8CFK2 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC4.56□□□□□ -1.68
Brf1Q8CFK2 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Gm4855-201ENSMUST00000192270 1967 ntBASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Brf1Q8CFK2 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Gm11923-201ENSMUST00000118135 508 ntBASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Gm11254-201ENSMUST00000122368 653 ntBASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Gm16327-201ENSMUST00000137146 228 ntBASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Gm23112-201ENSMUST00000158606 125 ntBASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Gm17919-201ENSMUST00000173344 312 ntBASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Gm24520-201ENSMUST00000179510 110 ntBASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Gm10292-201ENSMUST00000183142 581 ntBASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Npn2-202ENSMUST00000189275 235 ntBASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Gm28098-201ENSMUST00000191361 699 ntBASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Gm38080-201ENSMUST00000194035 268 ntBASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Gm42758-201ENSMUST00000202146 283 ntBASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Gm44149-201ENSMUST00000204256 226 ntBASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Gm19140-201ENSMUST00000209790 421 ntBASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Brf1Q8CFK2 AC140344.1-201ENSMUST00000223384 387 ntBASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Brf1Q8CFK2 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Brf1Q8CFK2 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Brf1Q8CFK2 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.54□□□□□ -1.68
Brf1Q8CFK2 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
Brf1Q8CFK2 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.54□□□□□ -1.68
Brf1Q8CFK2 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Brf1Q8CFK2 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Brf1Q8CFK2 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
Brf1Q8CFK2 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Brf1Q8CFK2 Gm15399-201ENSMUST00000118055 724 ntBASIC4.54□□□□□ -1.68
Brf1Q8CFK2 Gm15120-201ENSMUST00000120602 301 ntBASIC4.54□□□□□ -1.68
Brf1Q8CFK2 Gm22789-201ENSMUST00000157884 130 ntBASIC4.54□□□□□ -1.68
Brf1Q8CFK2 Mir6938-201ENSMUST00000184173 63 ntBASIC4.54□□□□□ -1.68
Brf1Q8CFK2 Gm29408-201ENSMUST00000187536 216 ntBASIC4.54□□□□□ -1.68
Brf1Q8CFK2 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC4.54□□□□□ -1.68
Brf1Q8CFK2 AC153141.1-201ENSMUST00000218636 501 ntBASIC4.54□□□□□ -1.68
Brf1Q8CFK2 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.54□□□□□ -1.68
Brf1Q8CFK2 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Brf1Q8CFK2 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Brf1Q8CFK2 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.54□□□□□ -1.68
Brf1Q8CFK2 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Brf1Q8CFK2 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Brf1Q8CFK2 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Brf1Q8CFK2 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Brf1Q8CFK2 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Brf1Q8CFK2 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Brf1Q8CFK2 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Brf1Q8CFK2 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Gm13331-201ENSMUST00000117500 448 ntBASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Gm14880-201ENSMUST00000117581 292 ntBASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Gm14364-201ENSMUST00000129209 267 ntBASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Gm25909-201ENSMUST00000157619 121 ntBASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Gm24853-201ENSMUST00000158026 121 ntBASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Gm24968-201ENSMUST00000179817 107 ntBASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Gm26960-201ENSMUST00000182263 412 ntBASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Gm28390-201ENSMUST00000185212 700 ntBASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Gm7039-201ENSMUST00000205138 346 ntBASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Gm20039-201ENSMUST00000210329 394 ntBASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Brf1Q8CFK2 Gm9309-201ENSMUST00000223537 546 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 166.1 ms