Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
PrkdcP97313 Gm27894-201ENSMUST00000184177 92 ntBASIC1.47□□□□□ -2.17
PrkdcP97313 Gm43967-201ENSMUST00000203787 301 ntBASIC1.47□□□□□ -2.17
PrkdcP97313 Gm36247-201ENSMUST00000211834 285 ntBASIC1.47□□□□□ -2.17
PrkdcP97313 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
PrkdcP97313 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
PrkdcP97313 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
PrkdcP97313 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
PrkdcP97313 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC1.47□□□□□ -2.17
PrkdcP97313 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
PrkdcP97313 Gm27271-201ENSMUST00000183509 170 ntBASIC1.47□□□□□ -2.17
PrkdcP97313 Gm28200-201ENSMUST00000187778 315 ntBASIC1.47□□□□□ -2.17
PrkdcP97313 Gm29378-201ENSMUST00000188723 315 ntBASIC1.47□□□□□ -2.17
PrkdcP97313 Gm28909-201ENSMUST00000189406 315 ntBASIC1.47□□□□□ -2.17
PrkdcP97313 Gm44521-201ENSMUST00000206469 217 ntBASIC1.47□□□□□ -2.17
PrkdcP97313 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
PrkdcP97313 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
PrkdcP97313 Gm12706-201ENSMUST00000121588 698 ntBASIC1.47□□□□□ -2.17
PrkdcP97313 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC1.47□□□□□ -2.17
PrkdcP97313 Mir7665-201ENSMUST00000184907 63 ntBASIC1.47□□□□□ -2.17
PrkdcP97313 Gm28149-201ENSMUST00000187102 378 ntBASIC1.47□□□□□ -2.17
PrkdcP97313 Gm28768-201ENSMUST00000189034 378 ntBASIC1.47□□□□□ -2.17
PrkdcP97313 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
PrkdcP97313 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC1.47□□□□□ -2.17
PrkdcP97313 AC161250.1-201ENSMUST00000213426 1111 ntBASIC1.47□□□□□ -2.17
PrkdcP97313 AC153532.1-201ENSMUST00000218126 1111 ntBASIC1.47□□□□□ -2.17
PrkdcP97313 Gm14415-201ENSMUST00000118260 1578 ntBASIC1.47□□□□□ -2.17
PrkdcP97313 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
PrkdcP97313 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC1.47□□□□□ -2.17
PrkdcP97313 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
PrkdcP97313 Gm25274-201ENSMUST00000104296 135 ntBASIC1.47□□□□□ -2.17
PrkdcP97313 Gm25910-201ENSMUST00000157620 140 ntBASIC1.47□□□□□ -2.17
PrkdcP97313 Gm44060-201ENSMUST00000204440 410 ntBASIC1.47□□□□□ -2.17
PrkdcP97313 Gm19177-201ENSMUST00000204520 613 ntBASIC1.47□□□□□ -2.17
PrkdcP97313 Gm45778-201ENSMUST00000211959 153 ntBASIC1.47□□□□□ -2.17
PrkdcP97313 Gm29884-201ENSMUST00000218403 453 ntBASIC1.47□□□□□ -2.17
PrkdcP97313 AC139845.2-201ENSMUST00000227504 436 ntBASIC1.47□□□□□ -2.17
PrkdcP97313 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
PrkdcP97313 Gm24098-201ENSMUST00000102075 109 ntBASIC1.46□□□□□ -2.18
PrkdcP97313 Gm25381-201ENSMUST00000102078 109 ntBASIC1.46□□□□□ -2.18
PrkdcP97313 Gm23467-201ENSMUST00000157127 159 ntBASIC1.46□□□□□ -2.18
PrkdcP97313 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
PrkdcP97313 Gm43669-201ENSMUST00000198229 436 ntBASIC1.46□□□□□ -2.18
PrkdcP97313 CT030187.1-201ENSMUST00000220605 252 ntBASIC1.46□□□□□ -2.18
PrkdcP97313 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
PrkdcP97313 AC099612.2-201ENSMUST00000226824 721 ntBASIC1.46□□□□□ -2.18
PrkdcP97313 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
PrkdcP97313 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
PrkdcP97313 Gm14602-201ENSMUST00000118625 340 ntBASIC1.46□□□□□ -2.18
PrkdcP97313 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC1.46□□□□□ -2.18
PrkdcP97313 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
PrkdcP97313 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC1.46□□□□□ -2.18
PrkdcP97313 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC1.46□□□□□ -2.18
PrkdcP97313 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC1.46□□□□□ -2.18
PrkdcP97313 AC132384.11-201ENSMUST00000219676 178 ntBASIC1.46□□□□□ -2.18
PrkdcP97313 CT030135.1-201ENSMUST00000223760 570 ntBASIC1.46□□□□□ -2.18
PrkdcP97313 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC1.46□□□□□ -2.18
PrkdcP97313 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
PrkdcP97313 Snord14c-201ENSMUST00000101927 86 ntBASIC1.46□□□□□ -2.18
PrkdcP97313 Gm14652-201ENSMUST00000118479 235 ntBASIC1.46□□□□□ -2.18
PrkdcP97313 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC1.46□□□□□ -2.18
PrkdcP97313 Gm22891-201ENSMUST00000158641 164 ntBASIC1.46□□□□□ -2.18
PrkdcP97313 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
PrkdcP97313 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
PrkdcP97313 Gm6850-201ENSMUST00000210031 530 ntBASIC1.46□□□□□ -2.18
PrkdcP97313 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC1.46□□□□□ -2.18
PrkdcP97313 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.45□□□□□ -2.18
PrkdcP97313 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
PrkdcP97313 Snord53-201ENSMUST00000175146 78 ntBASIC1.45□□□□□ -2.18
PrkdcP97313 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
PrkdcP97313 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
PrkdcP97313 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC1.45□□□□□ -2.18
PrkdcP97313 AC154224.1-201ENSMUST00000224367 403 ntBASIC1.45□□□□□ -2.18
PrkdcP97313 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
PrkdcP97313 Gm38211-201ENSMUST00000192814 7217 ntBASIC1.45□□□□□ -2.18
PrkdcP97313 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC1.45□□□□□ -2.18
PrkdcP97313 Gm7133-201ENSMUST00000187797 2039 ntBASIC1.45□□□□□ -2.18
PrkdcP97313 Gm12513-201ENSMUST00000118617 352 ntBASIC1.45□□□□□ -2.18
PrkdcP97313 Gm12803-201ENSMUST00000118907 821 ntBASIC1.45□□□□□ -2.18
PrkdcP97313 Gm14215-201ENSMUST00000120578 221 ntBASIC1.45□□□□□ -2.18
PrkdcP97313 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC1.45□□□□□ -2.18
PrkdcP97313 Gm22159-201ENSMUST00000158412 130 ntBASIC1.45□□□□□ -2.18
PrkdcP97313 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
PrkdcP97313 Gm26301-201ENSMUST00000104813 95 ntBASIC1.45□□□□□ -2.18
PrkdcP97313 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
PrkdcP97313 Gm2878-201ENSMUST00000170173 486 ntBASIC1.45□□□□□ -2.18
PrkdcP97313 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC1.45□□□□□ -2.18
PrkdcP97313 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
PrkdcP97313 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
PrkdcP97313 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC1.44□□□□□ -2.18
PrkdcP97313 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
PrkdcP97313 Gm26277-201ENSMUST00000157097 152 ntBASIC1.44□□□□□ -2.18
PrkdcP97313 Gm22093-201ENSMUST00000158980 111 ntBASIC1.44□□□□□ -2.18
PrkdcP97313 Gm17186-201ENSMUST00000171742 456 ntBASIC1.44□□□□□ -2.18
PrkdcP97313 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC1.44□□□□□ -2.18
PrkdcP97313 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC1.44□□□□□ -2.18
PrkdcP97313 Gm37692-201ENSMUST00000192633 232 ntBASIC1.44□□□□□ -2.18
PrkdcP97313 Gm2691-201ENSMUST00000203205 901 ntBASIC1.44□□□□□ -2.18
PrkdcP97313 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
PrkdcP97313 Gm23140-201ENSMUST00000082487 107 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 177.4 ms