Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Gm14622-201ENSMUST00000117117 468 ntBASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Gm7974-201ENSMUST00000117154 408 ntBASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Gm15176-201ENSMUST00000117734 135 ntBASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Gm26100-201ENSMUST00000157245 127 ntBASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Gm13147-202ENSMUST00000177526 1173 ntBASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Gm4761-201ENSMUST00000178086 582 ntBASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Gm4479-201ENSMUST00000178807 171 ntBASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Gm38076-201ENSMUST00000193889 450 ntBASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Gm43070-201ENSMUST00000196938 415 ntBASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Gm44513-201ENSMUST00000206811 439 ntBASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Gm45912-201ENSMUST00000210646 543 ntBASIC3.04□□□□□ -1.92
Trim3Q9R1R2 AL929265.1-201ENSMUST00000213427 125 ntBASIC3.04□□□□□ -1.92
Trim3Q9R1R2 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.04□□□□□ -1.92
Trim3Q9R1R2 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.04□□□□□ -1.92
Trim3Q9R1R2 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.04□□□□□ -1.92
Trim3Q9R1R2 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.04□□□□□ -1.92
Trim3Q9R1R2 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Gm22970-201ENSMUST00000083304 186 ntBASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Gm25126-201ENSMUST00000083343 102 ntBASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Gm22739-201ENSMUST00000083437 160 ntBASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Trim3Q9R1R2 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.04□□□□□ -1.92
Trim3Q9R1R2 Gm42721-201ENSMUST00000197165 1523 ntBASIC3.03□□□□□ -1.92
Trim3Q9R1R2 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.03□□□□□ -1.92
Trim3Q9R1R2 Gm4855-201ENSMUST00000192270 1967 ntBASIC3.03□□□□□ -1.92
Trim3Q9R1R2 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Trim3Q9R1R2 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Trim3Q9R1R2 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.03□□□□□ -1.92
Trim3Q9R1R2 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trim3Q9R1R2 Mir673-201ENSMUST00000102361 91 ntBASIC3.03□□□□□ -1.92
Trim3Q9R1R2 Gm24120-201ENSMUST00000103978 129 ntBASIC3.03□□□□□ -1.92
Trim3Q9R1R2 Gm11253-201ENSMUST00000118486 201 ntBASIC3.03□□□□□ -1.92
Trim3Q9R1R2 Gm15142-201ENSMUST00000121013 856 ntBASIC3.03□□□□□ -1.92
Trim3Q9R1R2 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Trim3Q9R1R2 Gm10075-201ENSMUST00000162030 545 ntBASIC3.03□□□□□ -1.92
Trim3Q9R1R2 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Trim3Q9R1R2 Gm27163-201ENSMUST00000184767 409 ntBASIC3.03□□□□□ -1.92
Trim3Q9R1R2 Gm28623-201ENSMUST00000187219 192 ntBASIC3.03□□□□□ -1.92
Trim3Q9R1R2 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Trim3Q9R1R2 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.03□□□□□ -1.92
Trim3Q9R1R2 Gm38280-201ENSMUST00000192610 158 ntBASIC3.03□□□□□ -1.92
Trim3Q9R1R2 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC3.03□□□□□ -1.92
Trim3Q9R1R2 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC3.03□□□□□ -1.92
Trim3Q9R1R2 Gm44274-201ENSMUST00000203417 256 ntBASIC3.03□□□□□ -1.92
Trim3Q9R1R2 Gm18729-201ENSMUST00000217230 621 ntBASIC3.03□□□□□ -1.92
Trim3Q9R1R2 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.03□□□□□ -1.92
Trim3Q9R1R2 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC3.03□□□□□ -1.92
Trim3Q9R1R2 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.03□□□□□ -1.92
Trim3Q9R1R2 AC120540.1-201ENSMUST00000221879 324 ntBASIC3.03□□□□□ -1.92
Trim3Q9R1R2 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.03□□□□□ -1.92
Trim3Q9R1R2 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.03□□□□□ -1.92
Trim3Q9R1R2 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Trim3Q9R1R2 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Trim3Q9R1R2 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Trim3Q9R1R2 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Trim3Q9R1R2 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.03□□□□□ -1.92
Trim3Q9R1R2 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
Trim3Q9R1R2 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.93
Trim3Q9R1R2 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.03□□□□□ -1.93
Trim3Q9R1R2 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Gm23691-201ENSMUST00000101878 107 ntBASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Gm6274-201ENSMUST00000118173 797 ntBASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Gm15025-201ENSMUST00000118434 418 ntBASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Gm26020-201ENSMUST00000122729 183 ntBASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Gm3123-201ENSMUST00000163480 480 ntBASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Gm3370-201ENSMUST00000171785 500 ntBASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Gm20612-201ENSMUST00000176318 236 ntBASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Gm44118-201ENSMUST00000204665 229 ntBASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
Trim3Q9R1R2 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.02□□□□□ -1.93
Trim3Q9R1R2 Gm46103-201ENSMUST00000217614 341 ntBASIC3.02□□□□□ -1.93
Trim3Q9R1R2 AC134860.6-201ENSMUST00000226038 285 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 217.8 ms