Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm15254-201ENSMUST00000149567 273 ntBASIC5.18□□□□□ -1.58
Col18a1P39061 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.18□□□□□ -1.58
Col18a1P39061 Gm25643-201ENSMUST00000158874 103 ntBASIC5.18□□□□□ -1.58
Col18a1P39061 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col18a1P39061 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC5.18□□□□□ -1.58
Col18a1P39061 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC5.18□□□□□ -1.58
Col18a1P39061 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC5.18□□□□□ -1.58
Col18a1P39061 Gm44870-201ENSMUST00000207291 357 ntBASIC5.18□□□□□ -1.58
Col18a1P39061 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC5.18□□□□□ -1.58
Col18a1P39061 Rny1-201ENSMUST00000083767 112 ntBASIC5.18□□□□□ -1.58
Col18a1P39061 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col18a1P39061 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col18a1P39061 Gm38375-201ENSMUST00000194610 2227 ntBASIC5.18□□□□□ -1.58
Col18a1P39061 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Col18a1P39061 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Col18a1P39061 Gm38105-201ENSMUST00000192112 2621 ntBASIC5.18□□□□□ -1.58
Col18a1P39061 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col18a1P39061 Gm37983-201ENSMUST00000193207 2006 ntBASIC5.17□□□□□ -1.58
Col18a1P39061 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Col18a1P39061 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col18a1P39061 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.17□□□□□ -1.58
Col18a1P39061 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col18a1P39061 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Col18a1P39061 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col18a1P39061 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC5.17□□□□□ -1.58
Col18a1P39061 Gm22958-201ENSMUST00000122512 184 ntBASIC5.17□□□□□ -1.58
Col18a1P39061 Gm25490-201ENSMUST00000158734 130 ntBASIC5.17□□□□□ -1.58
Col18a1P39061 Gm16101-201ENSMUST00000160695 430 ntBASIC5.17□□□□□ -1.58
Col18a1P39061 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC5.17□□□□□ -1.58
Col18a1P39061 Gm44084-201ENSMUST00000203947 409 ntBASIC5.17□□□□□ -1.58
Col18a1P39061 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Col18a1P39061 AC150314.1-201ENSMUST00000214798 238 ntBASIC5.17□□□□□ -1.58
Col18a1P39061 Gm31849-201ENSMUST00000220306 375 ntBASIC5.17□□□□□ -1.58
Col18a1P39061 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC5.17□□□□□ -1.58
Col18a1P39061 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col18a1P39061 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Col18a1P39061 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col18a1P39061 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col18a1P39061 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col18a1P39061 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col18a1P39061 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.17□□□□□ -1.58
Col18a1P39061 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
Col18a1P39061 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col18a1P39061 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Col18a1P39061 Gm11577-201ENSMUST00000118030 737 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm15986-201ENSMUST00000122153 400 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm26020-201ENSMUST00000122729 183 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col18a1P39061 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC5.16□□□□□ -1.58
Col18a1P39061 Gm27592-201ENSMUST00000157729 126 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm18604-201ENSMUST00000172535 558 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm22174-201ENSMUST00000175050 125 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm22692-201ENSMUST00000175055 125 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm27634-201ENSMUST00000175060 126 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm26460-201ENSMUST00000175061 126 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm22460-201ENSMUST00000175269 124 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm24365-201ENSMUST00000175384 125 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm44310-201ENSMUST00000175424 126 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm22639-201ENSMUST00000175591 125 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm24979-201ENSMUST00000178626 126 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm27743-201ENSMUST00000185136 126 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm43494-201ENSMUST00000197672 388 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 AL450317.1-201ENSMUST00000213941 291 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col18a1P39061 AC134420.1-201ENSMUST00000227027 289 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC5.16□□□□□ -1.58
Col18a1P39061 Gm22828-201ENSMUST00000083768 107 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col18a1P39061 Gm38032-201ENSMUST00000195052 1589 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col18a1P39061 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Col18a1P39061 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Col18a1P39061 Gm43889-201ENSMUST00000203950 3681 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col18a1P39061 Gm43032-201ENSMUST00000197967 3123 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm6565-201ENSMUST00000121217 438 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm16373-201ENSMUST00000129517 303 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC5.16□□□□□ -1.58
Col18a1P39061 Gm7846-201ENSMUST00000145844 274 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm26101-201ENSMUST00000157246 105 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm23855-201ENSMUST00000158377 135 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm15974-201ENSMUST00000159103 531 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm7925-201ENSMUST00000166690 401 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm23402-201ENSMUST00000178130 107 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm26189-201ENSMUST00000179879 107 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm18667-201ENSMUST00000186523 484 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm17929-201ENSMUST00000186851 627 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Col18a1P39061 Gm37658-201ENSMUST00000192672 315 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Ighv3-7-201ENSMUST00000193370 348 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC5.16□□□□□ -1.58
Col18a1P39061 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm45365-201ENSMUST00000209489 256 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 AC101677.1-201ENSMUST00000218590 158 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC5.16□□□□□ -1.58
Col18a1P39061 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC5.16□□□□□ -1.58
Col18a1P39061 Gm26454-201ENSMUST00000082682 107 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm24319-201ENSMUST00000083389 107 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC5.16□□□□□ -1.58
Col18a1P39061 Gm6361-201ENSMUST00000091031 435 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 148.1 ms